BLAST Results


BLASTP 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: GDDH13_1-1_prot.fasta; Atropa_belladonna.fasta; bitter_receptor_selection.fasta; Boea_hygrometrica.pep; Calotropis_gigantea.pep; Camptotheca_acuminata.fasta; Catharanthus_roseus.fasta; Dendrobium_officinale.pep; Digitalis_purpurea.fasta; Dioscorea_rotundata.pep; Dioscorea_villosa.fasta; Echinacea_purpurea.fasta; Ginkgo_biloba.pep; Ginseng.fa; Glycyrrhiza_uralensis.pep; Hoodia_gordonii.fasta; Human_Olfactory_Receptor.fasta; Hypericum_perforatum.fasta; Jatropha_curcas.pep; Lepidium_meyenii.pep; Macleaya_cordata.pep; Mentha_longifoli.pep; Mentha_longifoli.fa; Panax_quinquefolius.fasta; Punica_granatum.pep; Rauvolfia_serpentina.fasta; Rhodiola_rosea.pep; Rosmarinus_officinalis.fasta; Salvia_miltiorrhiza.pep; TRPs.fasta; Valeriana_officinalis.fasta 1,506,193 sequences; 494,698,394 total letters Query= Length=11 ***** No hits found ***** Lambda K H a alpha 0.332 0.150 0.552 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 5441682334 Database: GDDH13_1-1_prot.fasta Posted date: Nov 10, 2018 2:00 AM Number of letters in database: 16,905,909 Number of sequences in database: 45,116 Database: Atropa_belladonna.fasta Posted date: Mar 24, 2019 8:20 PM Number of letters in database: 17,323,337 Number of sequences in database: 67,848 Database: bitter_receptor_selection.fasta Posted date: Nov 10, 2018 10:12 AM Number of letters in database: 9,325 Number of sequences in database: 25 Database: Boea_hygrometrica.pep Posted date: Jan 8, 2019 4:30 PM Number of letters in database: 15,144,335 Number of sequences in database: 47,778 Database: Calotropis_gigantea.pep Posted date: Jan 8, 2019 1:06 AM Number of letters in database: 9,345,609 Number of sequences in database: 20,832 Database: Camptotheca_acuminata.fasta Posted date: Mar 24, 2019 8:21 PM Number of letters in database: 30,821,393 Number of sequences in database: 89,635 Database: Catharanthus_roseus.fasta Posted date: Mar 24, 2019 8:47 PM Number of letters in database: 22,539,943 Number of sequences in database: 70,476 Database: Dendrobium_officinale.pep Posted date: Jan 8, 2019 11:03 AM Number of letters in database: 11,846,126 Number of sequences in database: 35,567 Database: Digitalis_purpurea.fasta Posted date: Mar 24, 2019 8:30 PM Number of letters in database: 30,569,573 Number of sequences in database: 92,122 Database: Dioscorea_rotundata.pep Posted date: Jan 8, 2019 5:54 PM Number of letters in database: 8,167,551 Number of sequences in database: 19,086 Database: Dioscorea_villosa.fasta Posted date: Mar 24, 2019 8:34 PM Number of letters in database: 19,604,900 Number of sequences in database: 78,463 Database: Echinacea_purpurea.fasta Posted date: Mar 24, 2019 8:36 PM Number of letters in database: 23,701,865 Number of sequences in database: 84,935 Database: Ginkgo_biloba.pep Posted date: Jan 8, 2019 6:33 PM Number of letters in database: 16,549,037 Number of sequences in database: 41,840 Database: Ginseng.fa Posted date: Jan 8, 2019 6:50 PM Number of letters in database: 22,160,522 Number of sequences in database: 59,352 Database: Glycyrrhiza_uralensis.pep Posted date: Jan 8, 2019 2:47 PM Number of letters in database: 13,902,935 Number of sequences in database: 38,135 Database: Hoodia_gordonii.fasta Posted date: Mar 24, 2019 8:39 PM Number of letters in database: 7,589,719 Number of sequences in database: 41,349 Database: Human_Olfactory_Receptor.fasta Posted date: Nov 10, 2018 10:24 AM Number of letters in database: 10,540 Number of sequences in database: 34 Database: Hypericum_perforatum.fasta Posted date: Mar 24, 2019 8:44 PM Number of letters in database: 23,218,093 Number of sequences in database: 81,957 Database: Jatropha_curcas.pep Posted date: Jan 8, 2019 4:11 PM Number of letters in database: 15,779,437 Number of sequences in database: 32,547 Database: Lepidium_meyenii.pep Posted date: Jan 8, 2019 3:52 PM Number of letters in database: 37,149,326 Number of sequences in database: 96,417 Database: Macleaya_cordata.pep Posted date: Jan 8, 2019 2:05 AM Number of letters in database: 9,170,959 Number of sequences in database: 21,911 Database: Mentha_longifoli.pep Posted date: Jan 8, 2019 3:07 AM Number of letters in database: 1,311,348 Number of sequences in database: 4,329 Database: Mentha_longifoli.fa Posted date: Jan 8, 2019 3:45 AM Number of letters in database: 1,311,348 Number of sequences in database: 4,329 Database: Panax_quinquefolius.fasta Posted date: Mar 24, 2019 8:59 PM Number of letters in database: 23,540,582 Number of sequences in database: 79,847 Database: Punica_granatum.pep Posted date: Jan 8, 2019 6:07 PM Number of letters in database: 10,430,463 Number of sequences in database: 29,127 Database: Rauvolfia_serpentina.fasta Posted date: Mar 24, 2019 9:10 PM Number of letters in database: 26,378,518 Number of sequences in database: 85,221 Database: Rhodiola_rosea.pep Posted date: Jan 8, 2019 4:46 PM Number of letters in database: 10,932,259 Number of sequences in database: 31,517 Database: Rosmarinus_officinalis.fasta Posted date: Mar 24, 2019 9:20 PM Number of letters in database: 41,444,016 Number of sequences in database: 109,402 Database: Salvia_miltiorrhiza.pep Posted date: Jan 8, 2019 5:21 AM Number of letters in database: 12,390,255 Number of sequences in database: 34,575 Database: TRPs.fasta Posted date: Nov 10, 2018 9:48 AM Number of letters in database: 73,502 Number of sequences in database: 71 Database: Valeriana_officinalis.fasta Posted date: Mar 24, 2019 9:25 PM Number of letters in database: 15,375,669 Number of sequences in database: 62,350 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40