BLAST Results |SRR13131364.1|SRR13131364.2|
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panax_ginseng.fa 56,188 sequences; 2,130,373,199 total letters Query= SRR13131364.1 FCD243UACXX:6:1101:5513:1974# length=100 Length=100 Score E Sequences producing significant alignments: (Bits) Value scaffold36142 71.6 4e-11 > SRR13131364.1 on scaffold36142 Length=112213 Score = 71.6 bits (78), Expect = 4e-11 Identities = 39/39 (100%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 28 ATACCATGGATCTACTCTCATAGCAGCTAGTCTTTCTGG 66 ||||||||||||||||||||||||||||||||||||||| Sbjct 77567 ATACCATGGATCTACTCTCATAGCAGCTAGTCTTTCTGG 77529 Score = 64.4 bits (70), Expect = 6e-09 Identities = 35/35 (100%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 66 GCCTTCCTGCACTGCATCAAAAATTTGATCTGCCA 100 ||||||||||||||||||||||||||||||||||| Sbjct 77454 GCCTTCCTGCACTGCATCAAAAATTTGATCTGCCA 77420 Score = 46.4 bits (50), Expect = 0.002 Identities = 28/30 (93%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1 GAAAAAGTTTATTGCTCGTGCAAAATCATA 30 |||||| |||||||||||||||||||| || Sbjct 77680 GAAAAAATTTATTGCTCGTGCAAAATCGTA 77651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151140806037 Query= SRR13131364.2 FCD243UACXX:6:1101:5607:1991# length=100 Length=100 Score E Sequences producing significant alignments: (Bits) Value scaffold4502 143 8e-33 scaffold34445 73.4 1e-11 scaffold29313 68.0 5e-10 scaffold2640 64.4 6e-09 scaffold24756 64.4 6e-09 scaffold14842 64.4 6e-09 scaffold12122 64.4 6e-09 C4966173 35.6 3.0 > SRR13131364.2 on scaffold4502 Length=316809 Score = 143 bits (158), Expect = 8e-33 Identities = 79/79 (100%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 1 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 310265 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 310324 Query 61 CACGGAAGGGCAGGATTCC 79 ||||||||||||||||||| Sbjct 310325 CACGGAAGGGCAGGATTCC 310343 Score = 37.4 bits (40), Expect = 0.86 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 78 CCATTGTGAGGGAGCTTCGCTGG 100 ||||||||||||| ||||||||| Sbjct 311342 CCATTGTGAGGGATCTTCGCTGG 311364 > SRR13131364.2 on scaffold34445 Length=72241 Score = 73.4 bits (80), Expect = 1e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 60 ||||||||||||||| | |||||||| || ||||| || || ||||||||||||||||| Sbjct 19700 ATCTGAATAGTACTTAACTGCTACACGCTTTCCTTCAGAGTCCAGAAGAAGAATGTTTTT 19641 > SRR13131364.2 on scaffold29313 Length=254734 Score = 68.0 bits (74), Expect = 5e-10 Identities = 51/60 (85%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 60 ||||||||||||||| | |||||||| || | || || |||||||||||||||||||| Sbjct 128926 ATCTGAATAGTACTTAACTGCTACACGCTTTCTTTTAGAGTCTAGAAGAAGAATGTTTTT 128985 > SRR13131364.2 on scaffold2640 Length=114618 Score = 64.4 bits (70), Expect = 6e-09 Identities = 50/60 (83%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 60 ||||||||||||||| | |||||||| || | ||| || || | ||||||||||||||| Sbjct 70291 ATCTGAATAGTACTTAACTGCTACACGCTTTCTTTCAGAGTCCACAAGAAGAATGTTTTT 70350 > SRR13131364.2 on scaffold24756 Length=126129 Score = 64.4 bits (70), Expect = 6e-09 Identities = 50/60 (83%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 60 ||||||||| ||||| | |||||||| || ||||| || || | ||||||||||||||| Sbjct 64256 ATCTGAATAATACTTAACTGCTACACGCTTTCCTTCAGAGTCCAAAAGAAGAATGTTTTT 64197 > SRR13131364.2 on scaffold14842 Length=194454 Score = 64.4 bits (70), Expect = 6e-09 Identities = 50/60 (83%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 60 ||||||||||||||| | ||||| || || | ||| || || ||||||||||||||||| Sbjct 119808 ATCTGAATAGTACTTAACTGCTACGCGCTTTCTTTCAGAGTCCAGAAGAAGAATGTTTTT 119749 > SRR13131364.2 on scaffold12122 Length=47766 Score = 64.4 bits (70), Expect = 6e-09 Identities = 50/60 (83%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 ATCTGAATAGTACTTGATAGCTACACGTTTCCCTTCTGAATCTAGAAGAAGAATGTTTTT 60 ||||||||||||||| | |||||||| || | || | |||||||||||||||||||| Sbjct 11231 ATCTGAATAGTACTTAACTGCTACACGCTTTCTTTTAAAGTCTAGAAGAAGAATGTTTTT 11290 > SRR13131364.2 on C4966173 Length=89103 Score = 35.6 bits (38), Expect = 3.0 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 40 ATCTAGAAGAAGAATGTTTTTCAC 63 ||||| |||||| ||||||||||| Sbjct 23709 ATCTAAAAGAAGTATGTTTTTCAC 23686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151140806037 Database: Panax_ginseng.fa Posted date: Jan 8, 2019 5:31 PM Number of letters in database: 2,130,373,199 Number of sequences in database: 56,188 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2