BLAST Results
BLASTX 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salvia_miltiorrhiza.pep 34,575 sequences; 12,390,255 total letters Query= Length=204 Score E Sequences producing significant alignments: (Bits) Value evm.model.C148101.1 gene=EVM%20prediction%20C148101.1 [translat... 139 3e-44 evm.model.scaffold142.37 gene=EVM%20prediction%20scaffold142.37... 123 6e-38 evm.model.C222087.12 gene=EVM%20prediction%20C222087.12 [transl... 107 1e-31 evm.model.scaffold10774.9 gene=EVM%20prediction%20scaffold10774... 101 7e-29 evm.model.C222357.3 gene=EVM%20prediction%20C222357.3 [translat... 28.1 0.45 evm.model.scaffold11970.1 gene=EVM%20prediction%20scaffold11970... 26.6 1.6 evm.model.scaffold163.14 gene=EVM%20prediction%20scaffold163.14... 26.2 1.9 evm.model.scaffold2530.1 gene=EVM%20prediction%20scaffold2530.1... 25.4 3.6 evm.model.scaffold11970.1.1 gene=EVM%20prediction%20scaffold119... 25.0 4.3 evm.model.scaffold10942.1 gene=EVM%20prediction%20scaffold10942... 24.3 9.6 > Query1 on evm.model.C148101.1 gene=EVM%20prediction%20C148101.1 [translate_table: standard] Length=67 Score = 139 bits (351), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 67/67 (100%), Positives = 67/67 (100%), Gaps = 0/67 (0%) Frame = +1 Query 1 MWRDKSPGLKILWLWTFGTAVVPVTNVMWTRMRDMEQIINAQDQHPPRAAAATDHTSASP 180 MWRDKSPGLKILWLWTFGTAVVPVTNVMWTRMRDMEQIINAQDQHPPRAAAATDHTSASP Sbjct 1 MWRDKSPGLKILWLWTFGTAVVPVTNVMWTRMRDMEQIINAQDQHPPRAAAATDHTSASP 60 Query 181 ESVQEES 201 ESVQEES Sbjct 61 ESVQEES 67 > Query1 on evm.model.scaffold142.37 gene=EVM%20prediction%20scaffold142.37 [translate_table: standard] Length=68 Score = 123 bits (309), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 62/68 (91%), Positives = 63/68 (93%), Gaps = 1/68 (1%) Frame = +1 Query 1 MWRDKSPGLKILWLWTFGTAVVPVTNVMWTRMRDMEQIINAQDQHPPRAAAAT-DHTSAS 177 MWRDKSPGLKILWLWTFGTA V VTNVMWTRMRDMEQIINAQDQHPPRAAAA D+TSAS Sbjct 1 MWRDKSPGLKILWLWTFGTAAVLVTNVMWTRMRDMEQIINAQDQHPPRAAAAAEDNTSAS 60 Query 178 PESVQEES 201 ESVQEES Sbjct 61 LESVQEES 68 > Query1 on evm.model.C222087.12 gene=EVM%20prediction%20C222087.12 [translate_table: standard] Length=68 Score = 107 bits (267), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 63/68 (93%), Positives = 63/68 (93%), Gaps = 1/68 (1%) Frame = +1 Query 1 MWRDKSPGLKILWLWTFGTAVVPVTNVMWTRMRDMEQIINAQDQHPPR-AAAATDHTSAS 177 MWRDKSPGLKILWLWTFGTA V VTNVMWTRMRDMEQIINAQDQHPPR AAAA D TSAS Sbjct 1 MWRDKSPGLKILWLWTFGTAAVLVTNVMWTRMRDMEQIINAQDQHPPRAAAAAADSTSAS 60 Query 178 PESVQEES 201 PESVQEES Sbjct 61 PESVQEES 68 > Query1 on evm.model.scaffold10774.9 gene=EVM%20prediction%20scaffold10774.9 [translate_table: standard] Length=92 Score = 101 bits (251), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 60/92 (65%), Positives = 62/92 (67%), Gaps = 25/92 (27%) Frame = +1 Query 1 MWRDKSPGLKILWLWTFGTAVVPV------------------------TNVMWTRMRDME 108 MWRDKSPGLKILWLWTFGTA + TNVMWTRMRDME Sbjct 1 MWRDKSPGLKILWLWTFGTAAGNIHISHNLSLTLNANLTVLVVVAVLVTNVMWTRMRDME 60 Query 109 QIINAQDQHPPRAAAAT-DHTSASPESVQEES 201 QIINAQDQHPPRAAAA D+TSAS ESVQEES Sbjct 61 QIINAQDQHPPRAAAAAEDNTSASLESVQEES 92 > Query1 on evm.model.C222357.3 gene=EVM%20prediction%20C222357.3 [translate_table: standard] Length=408 Score = 28.1 bits (61), Expect = 0.45, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 16/26 (62%), Gaps = 0/26 (0%) Frame = +1 Query 106 EQIINAQDQHPPRAAAATDHTSASPE 183 +QII + DQ PP +AAA H P+ Sbjct 198 DQIIASSDQTPPLSAAAPPHFGTYPD 223 > Query1 on evm.model.scaffold11970.1 gene=EVM%20prediction%20scaffold11970.1 [translate_table: standard] Length=1050 Score = 26.6 bits (57), Expect = 1.6, Method: Composition-based stats. Identities = 15/47 (32%), Positives = 19/47 (40%), Gaps = 6/47 (13%) Frame = -2 Query 131 WSW------ALMICSMSLILVHITFVTGTTAVPKVHSHKIFSPGLLS 9 W W L +C S+IL+ V +H H F PGL S Sbjct 292 WLWNPRKTMMLHVCQSSIILILTVVFEEAELVEMLHLHPRFKPGLNS 338 > Query1 on evm.model.scaffold163.14 gene=EVM%20prediction%20scaffold163.14 [translate_table: standard] Length=1153 Score = 26.2 bits (56), Expect = 1.9, Method: Composition-based stats. Identities = 13/29 (45%), Positives = 16/29 (55%), Gaps = 0/29 (0%) Frame = +3 Query 15 ESRTEDLMAVDLRNCRCASDKCYVDKNEG 101 ESR +M +L N C+SD C VD G Sbjct 807 ESRLLLVMRTELDNDSCSSDVCCVDSLSG 835 > Query1 on evm.model.scaffold2530.1 gene=EVM%20prediction%20scaffold2530.1 [translate_table: standard] Length=1697 Score = 25.4 bits (54), Expect = 3.6, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 5/42 (12%) Frame = -2 Query 164 WSVAAAARGGCWSWALMICSMSLILVHITFVTGTTAVPKVHS 39 W++ A+AR C + M HI+F+ + VPK+HS Sbjct 533 WAIEASARFLCLYASYMEERQ-----HISFLVDLSLVPKMHS 569 > Query1 on evm.model.scaffold11970.1.1 gene=EVM%20prediction%20scaffold11970.1 [translate_table: standard] Length=751 Score = 25.0 bits (53), Expect = 4.3, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (46%), Gaps = 0/37 (0%) Frame = -2 Query 119 LMICSMSLILVHITFVTGTTAVPKVHSHKIFSPGLLS 9 L +C S+IL+ V +H H F PGL S Sbjct 3 LHVCQSSIILILTVVFEEAELVEMLHLHPRFKPGLNS 39 > Query1 on evm.model.scaffold10942.1 gene=EVM%20prediction%20scaffold10942.1 [translate_table: standard] Length=636 Score = 24.3 bits (51), Expect = 9.6, Method: Composition-based stats. Identities = 10/19 (53%), Positives = 14/19 (74%), Gaps = 2/19 (11%) Frame = -2 Query 83 ITFVTGTTAVPK--VHSHK 33 + + +GTTA PK VHSH+ Sbjct 250 LNYTSGTTAAPKGVVHSHR 268 Lambda K H a alpha 0.318 0.134 0.401 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 308203140 Database: Salvia_miltiorrhiza.pep Posted date: Jan 8, 2019 5:21 AM Number of letters in database: 12,390,255 Number of sequences in database: 34,575 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 12 Window for multiple hits: 40