BLAST Results
BLASTP 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Mentha_longifoli.fa 4,329 sequences; 1,311,348 total letters Query= Length=265 Score E Sequences producing significant alignments: (Bits) Value WP_000003071.1 MULTISPECIES: lysine--tRNA ligase [Proteobacteria] 543 0.0 WP_001295090.1 MULTISPECIES: lysine--tRNA ligase heat inducible... 504 4e-179 WP_000004771.1 MULTISPECIES: elongation factor P--(R)-beta-lysi... 114 2e-30 WP_000117881.1 MULTISPECIES: asparagine--tRNA ligase [Proteobac... 58.5 1e-10 WP_001258678.1 MULTISPECIES: aspartate--tRNA ligase [Enterobact... 56.6 4e-10 WP_001301303.1 MULTISPECIES: IMPACT family member YigZ [Enterob... 27.7 0.66 WP_000832450.1 MULTISPECIES: TonB dependent receptor [Enterobac... 25.4 4.8 WP_000535976.1 MULTISPECIES: guanosine-5'-triphosphate,3'-dipho... 25.4 4.9 WP_000069410.1 MULTISPECIES: phosphoenolpyruvate synthase [Ente... 24.6 8.3 WP_000280494.1 MULTISPECIES: bifunctional GTP diphosphokinase/g... 24.6 8.5 > Query1 on WP_000003071.1 MULTISPECIES: lysine--tRNA ligase [Proteobacteria] Length=505 Score = 543 bits (1400), Expect = 0.0, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 60 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT Sbjct 241 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 300 Query 61 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI 120 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI Sbjct 301 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI 360 Query 121 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 180 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG Sbjct 361 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420 Query 181 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 240 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID Sbjct 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480 Query 241 RMVMLFTNSHTIRDVILFPAMRPVK 265 RMVMLFTNSHTIRDVILFPAMRPVK Sbjct 481 RMVMLFTNSHTIRDVILFPAMRPVK 505 > Query1 on WP_001295090.1 MULTISPECIES: lysine--tRNA ligase heat inducible [Enterobacteriaceae] Length=505 Score = 504 bits (1298), Expect = 4e-179, Method: Compositional matrix adjust. Identities = 244/265 (92%), Positives = 255/265 (96%), Gaps = 0/265 (0%) Query 1 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 60 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADY DLIELTESLFRT Sbjct 241 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT 300 Query 61 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI 120 LAQ++LG T+VTYG+ DFGKPFEKLTMREAIKKYRPETDMADLDNFD+AKA+AESIGI Sbjct 301 LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI 360 Query 121 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 180 VEKSWGLGRIVTEIF+EVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG Sbjct 361 TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420 Query 181 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 240 REIGNGFSELNDAEDQA+RF +QV AK AGDDEAMFYDEDYVTALE+GLPPTAGLGIGID Sbjct 421 REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID 480 Query 241 RMVMLFTNSHTIRDVILFPAMRPVK 265 RM+MLFTNSHTIRDVILFPAMRP K Sbjct 481 RMIMLFTNSHTIRDVILFPAMRPQK 505 > Query1 on WP_000004771.1 MULTISPECIES: elongation factor P--(R)-beta-lysine ligase [Proteobacteria] Length=325 Score = 114 bits (285), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 135/266 (51%), Gaps = 23/266 (9%) Query 1 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 60 E ++KRL+V G VF++ R+FRNE + HNPEFTM+E Y + D L+ + L + Sbjct 78 EYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQ 137 Query 61 LAQDILGKTEVTYGDVTLDFGK--PF--EKLTMREAIKKYRPETDMADLDNFDSAKAIAE 116 + D ++Y L + + P +K +RE K DL N + + Sbjct 138 VL-DCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKL-------DLSNVADTEEDRD 189 Query 117 SIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEF 176 ++ + + ++G + I +E +PTF+ +PA + LA+ + + + +RFE Sbjct 190 TL-LQLLFTFG---VEPNIGKE-------KPTFVYHFPASQASLAQISTEDHRVAERFEV 238 Query 177 FIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLG 236 + G E+ NGF EL DA +Q QRF + A D++ + AL+ G+P +G+ Sbjct 239 YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVA 298 Query 237 IGIDRMVMLFTNSHTIRDVILFPAMR 262 +G+DR+VML + T+ +VI F R Sbjct 299 LGVDRLVMLALGAETLAEVIAFSVDR 324 > Query1 on WP_000117881.1 MULTISPECIES: asparagine--tRNA ligase [Proteobacteria] Length=466 Score = 58.5 bits (140), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 109/256 (43%), Gaps = 26/256 (10%) Query 11 GFERVFEINRNFRNEGISV-RHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 69 +++ FR E + RH EF M+E +A+A+ D+ L E++ + + + +L Sbjct 222 ALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVL--- 278 Query 70 EVTYGDVTLDFGKPFEKLTMREAIKKYRP--ETDMADLDNFDSAKAIAESIGIHVEKS-- 125 + D K F + ++A+ + E D A +D D A I E+ G E Sbjct 279 -----EERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTD-AVTILENCGRKFENPVY 332 Query 126 WGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 185 WG+ + +E +AE H P + YP ++ R + + + + + Sbjct 333 WGVD-LSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDV------LAP 385 Query 186 GFSELNDAEDQAQRF--LDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMV 243 G E+ + +R LD+ + + E ++ Y +G P +G G+G +R++ Sbjct 386 GIGEIIGGSQREERLDVLDERMLEMGLNKEDYWW---YRDLRRYGTVPHSGFGLGFERLI 442 Query 244 MLFTNSHTIRDVILFP 259 T +RDVI FP Sbjct 443 AYVTGVQNVRDVIPFP 458 > Query1 on WP_001258678.1 MULTISPECIES: aspartate--tRNA ligase [Enterobacteriaceae] Length=590 Score = 56.6 bits (135), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/147 (27%), Positives = 66/147 (45%), Gaps = 5/147 (3%) Query 114 IAESIGIHVEKSWG-LGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITD 172 + + +G+ E W L I +FE+ E L P +++ + + + Sbjct 413 VGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVAN 472 Query 173 RFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 232 ++ I G E+G G +++ D Q + + E + + AL++G PP Sbjct 473 AYDMVINGYEVGGGSVRIHNG-DMQQTVFGILGINEEEQREKFGF---LLDALKYGTPPH 528 Query 233 AGLGIGIDRMVMLFTNSHTIRDVILFP 259 AGL G+DR+ ML T + IRDVI FP Sbjct 529 AGLAFGLDRLTMLLTGTDNIRDVIAFP 555 Score = 45.4 bits (106), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/115 (29%), Positives = 60/115 (52%), Gaps = 21/115 (18%) Query 1 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 60 +L+ + L++ GF+R ++I + FR+E + PEFT +++ ++ + E+ E+L R Sbjct 195 QLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRH 254 Query 61 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKY---RPE-------TDMADL 105 L ++ G V GD F +T EA ++Y +P+ TD+ADL Sbjct 255 LWLEVKG---VDLGD--------FPVMTFAEAERRYGSDKPDLRNPMELTDVADL 298 > Query1 on WP_001301303.1 MULTISPECIES: IMPACT family member YigZ [Enterobacteriaceae] Length=204 Score = 27.7 bits (60), Expect = 0.66, Method: Compositional matrix adjust. Identities = 15/36 (42%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Query 83 PFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESI 118 P +T+ E IKK R T +A D ++AKA ES+ Sbjct 7 PAAPVTVVEEIKKSRFITLLAHTDGVEAAKAFVESV 42 > Query1 on WP_000832450.1 MULTISPECIES: TonB dependent receptor [Enterobacteriaceae] Length=790 Score = 25.4 bits (54), Expect = 4.8, Method: Compositional matrix adjust. Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 0/35 (0%) Query 162 RRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQ 196 R+ D+NP+I + G + NG+ E N ++Q Sbjct 617 RQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNQ 651 > Query1 on WP_000535976.1 MULTISPECIES: guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [Enterobacteriaceae] Length=494 Score = 25.4 bits (54), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/97 (22%), Positives = 38/97 (39%), Gaps = 6/97 (6%) Query 71 VTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGR 130 + YG + L + T+R +++ M D+D +A + VEK W L Sbjct 295 LVYGMLHLTVEQDIRSRTLRNIQRRF-----MIDIDQAQRVAKVAANFFDQVEKEWHLEA 349 Query 131 IVTEIFEEVAEAHLIQPTF-ITEYPAEVSPLARRNDV 166 I ++ + H I + + P + L R D+ Sbjct 350 ISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDL 386 > Query1 on WP_000069410.1 MULTISPECIES: phosphoenolpyruvate synthase [Enterobacteriaceae] Length=792 Score = 24.6 bits (52), Expect = 8.3, Method: Compositional matrix adjust. Identities = 11/38 (29%), Positives = 19/38 (50%), Gaps = 0/38 (0%) Query 120 IHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEV 157 + + +WGLG +V + E ++ +PT PA V Sbjct 219 VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIV 256 > Query1 on WP_000280494.1 MULTISPECIES: bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Enterobacteriaceae] Length=702 Score = 24.6 bits (52), Expect = 8.5, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 0/34 (0%) Query 55 ESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLT 88 E+L L D++ T TY D+ FGK +L Sbjct 64 ETLMAALLHDVIEDTPATYQDMEQLFGKSVAELV 97 Lambda K H a alpha 0.320 0.139 0.401 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 175015710 Database: Mentha_longifoli.fa Posted date: Jan 8, 2019 3:45 AM Number of letters in database: 1,311,348 Number of sequences in database: 4,329 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40