BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salvia_miltiorrhiza.cds 34,575 sequences; 37,274,490 total letters Query= Length=800 Score E Sequences producing significant alignments: (Bits) Value evm.model.scaffold4985.8 gene=EVM%20prediction%20scaffold4985.8 39.2 0.046 evm.model.scaffold5834.21 gene=EVM%20prediction%20scaffold5834.21 33.7 1.9 evm.model.scaffold10262.3 gene=EVM%20prediction%20scaffold10262.3 33.7 1.9 evm.model.C209569.1 gene=EVM%20prediction%20C209569.1 33.7 1.9 evm.model.scaffold9070.16 gene=EVM%20prediction%20scaffold9070.16 31.9 6.8 evm.model.scaffold888.19 gene=EVM%20prediction%20scaffold888.19 31.9 6.8 evm.model.scaffold5783.3 gene=EVM%20prediction%20scaffold5783.3 31.9 6.8 evm.model.scaffold5061.1 gene=EVM%20prediction%20scaffold5061.1 31.9 6.8 evm.model.scaffold4438.10 gene=EVM%20prediction%20scaffold4438.10 31.9 6.8 evm.model.scaffold3460.12.1.1 gene=EVM%20prediction%20scaffold3... 31.9 6.8 evm.model.scaffold1868.18 gene=EVM%20prediction%20scaffold1868.18 31.9 6.8 evm.model.scaffold1849.1 gene=EVM%20prediction%20scaffold1849.1 31.9 6.8 evm.model.scaffold1485.7 gene=EVM%20prediction%20scaffold1485.7 31.9 6.8 evm.model.scaffold12763.39 gene=EVM%20prediction%20scaffold1276... 31.9 6.8 evm.model.scaffold12658.17 gene=EVM%20prediction%20scaffold1265... 31.9 6.8 evm.model.scaffold12394.4 gene=EVM%20prediction%20scaffold12394.4 31.9 6.8 evm.model.scaffold10998.8.1 gene=EVM%20prediction%20scaffold109... 31.9 6.8 evm.model.scaffold10998.8 gene=EVM%20prediction%20scaffold10998.8 31.9 6.8 evm.model.C218119.3 gene=EVM%20prediction%20C218119.3 31.9 6.8 evm.model.C209281.2 gene=EVM%20prediction%20C209281.2 31.9 6.8 > Query1 on evm.model.scaffold4985.8 gene=EVM%20prediction%20scaffold4985.8 Length=5586 Score = 39.2 bits (42), Expect = 0.046 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Plus Query 418 ATTTCATC-TAATTGGTTGTGAACTGAAGAACA 449 || ||||| || |||||||||||||||||||| Sbjct 890 ATATCATCCTACGTGGTTGTGAACTGAAGAACA 922 > Query1 on evm.model.scaffold5834.21 gene=EVM%20prediction%20scaffold5834.21 Length=849 Score = 33.7 bits (36), Expect = 1.9 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 607 CAAAATTTCCATTATCTATGA 627 |||||| |||||||||||||| Sbjct 28 CAAAATGTCCATTATCTATGA 8 > Query1 on evm.model.scaffold10262.3 gene=EVM%20prediction%20scaffold10262.3 Length=507 Score = 33.7 bits (36), Expect = 1.9 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 365 AAAACTCGAATTCACAATTAAAT 387 ||||||||||||||| || |||| Sbjct 28 AAAACTCGAATTCACCATAAAAT 6 > Query1 on evm.model.C209569.1 gene=EVM%20prediction%20C209569.1 Length=702 Score = 33.7 bits (36), Expect = 1.9 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 662 AGAAGTTGAATCTGAATA 679 |||||||||||||||||| Sbjct 351 AGAAGTTGAATCTGAATA 368 > Query1 on evm.model.scaffold9070.16 gene=EVM%20prediction%20scaffold9070.16 Length=2259 Score = 31.9 bits (34), Expect = 6.8 Identities = 23/27 (85%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 289 TAGTGTTGGTTGTGAATTCATGCTTTA 315 ||||||||||| | |||||| ||| || Sbjct 1541 TAGTGTTGGTTATCAATTCAAGCTATA 1567 > Query1 on evm.model.scaffold888.19 gene=EVM%20prediction%20scaffold888.19 Length=3057 Score = 31.9 bits (34), Expect = 6.8 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 511 ATTCACATCAATTTCTCCATCA 532 |||| |||| |||||||||||| Sbjct 1347 ATTCCCATCTATTTCTCCATCA 1326 > Query1 on evm.model.scaffold5783.3 gene=EVM%20prediction%20scaffold5783.3 Length=804 Score = 31.9 bits (34), Expect = 6.8 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 705 GGTGAACGTAGAGGTGACGGTG 726 |||||||||||||||| |||| Sbjct 325 GGTGAACGTAGAGGTGGGGGTG 346 > Query1 on evm.model.scaffold5061.1 gene=EVM%20prediction%20scaffold5061.1 Length=651 Score = 31.9 bits (34), Expect = 6.8 Identities = 23/27 (85%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 521 ATTTCTCCATCACTTGTATTTTTCTAT 547 ||||||||||||||| || |||||| Sbjct 274 ATTTCTCCATCACTTTCTTTATTCTAT 248 > Query1 on evm.model.scaffold4438.10 gene=EVM%20prediction%20scaffold4438.10 Length=3978 Score = 31.9 bits (34), Expect = 6.8 Identities = 17/17 (100%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 518 TCAATTTCTCCATCACT 534 ||||||||||||||||| Sbjct 3362 TCAATTTCTCCATCACT 3346 > Query1 on evm.model.scaffold3460.12.1.1 gene=EVM%20prediction%20scaffold3460.12 Length=558 Score = 31.9 bits (34), Expect = 6.8 Identities = 17/17 (100%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 569 TTTTTTCTTCCAATTTT 585 ||||||||||||||||| Sbjct 518 TTTTTTCTTCCAATTTT 534 > Query1 on evm.model.scaffold1868.18 gene=EVM%20prediction%20scaffold1868.18 Length=837 Score = 31.9 bits (34), Expect = 6.8 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 288 ATAGTGTTGGTTGTGAATTCAT 309 |||||| ||||||||||| ||| Sbjct 254 ATAGTGATGGTTGTGAATACAT 233 > Query1 on evm.model.scaffold1849.1 gene=EVM%20prediction%20scaffold1849.1 Length=837 Score = 31.9 bits (34), Expect = 6.8 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 288 ATAGTGTTGGTTGTGAATTCAT 309 |||||| ||||||||||| ||| Sbjct 254 ATAGTGATGGTTGTGAATACAT 233 > Query1 on evm.model.scaffold1485.7 gene=EVM%20prediction%20scaffold1485.7 Length=3747 Score = 31.9 bits (34), Expect = 6.8 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 454 CAAAACAAACTCACCTACACAA 475 |||||||||||||| |||||| Sbjct 816 CAAAACAAACTCACAGACACAA 837 > Query1 on evm.model.scaffold12763.39 gene=EVM%20prediction%20scaffold12763.39 Length=2238 Score = 31.9 bits (34), Expect = 6.8 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 781 AACCTCAGTTCTTCTTTCTC 800 ||||||||||| |||||||| Sbjct 557 AACCTCAGTTCCTCTTTCTC 538 > Query1 on evm.model.scaffold12658.17 gene=EVM%20prediction%20scaffold12658.17 Length=717 Score = 31.9 bits (34), Expect = 6.8 Identities = 23/27 (85%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 521 ATTTCTCCATCACTTGTATTTTTCTAT 547 ||||||||||||||| || |||||| Sbjct 274 ATTTCTCCATCACTTTCTTTATTCTAT 248 > Query1 on evm.model.scaffold12394.4 gene=EVM%20prediction%20scaffold12394.4 Length=2076 Score = 31.9 bits (34), Expect = 6.8 Identities = 27/33 (82%), Gaps = 3/33 (9%) Strand=Plus/Plus Query 159 TGTGAATTTAAGATTTAAAACTCGAATTTACGA 191 ||||||||||| ||||| || ||||| |||| Sbjct 384 TGTGAATTTAAAATTTAGAA---GAATTGACGA 413 > Query1 on evm.model.scaffold10998.8.1 gene=EVM%20prediction%20scaffold10998.8 Length=1200 Score = 31.9 bits (34), Expect = 6.8 Identities = 25/29 (86%), Gaps = 1/29 (3%) Strand=Plus/Plus Query 295 TGGTTGTGAATTCATGCTTTAAAATTTGA 323 ||||| |||| |||||||||||||||| Sbjct 1049 TGGTTTCGAATG-ATGCTTTAAAATTTGA 1076 > Query1 on evm.model.scaffold10998.8 gene=EVM%20prediction%20scaffold10998.8 Length=1200 Score = 31.9 bits (34), Expect = 6.8 Identities = 25/29 (86%), Gaps = 1/29 (3%) Strand=Plus/Plus Query 295 TGGTTGTGAATTCATGCTTTAAAATTTGA 323 ||||| |||| |||||||||||||||| Sbjct 1049 TGGTTTCGAATG-ATGCTTTAAAATTTGA 1076 > Query1 on evm.model.C218119.3 gene=EVM%20prediction%20C218119.3 Length=378 Score = 31.9 bits (34), Expect = 6.8 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 710 ACGTAGAGGTGACGGTGCAG 729 ||||| |||||||||||||| Sbjct 342 ACGTATAGGTGACGGTGCAG 361 > Query1 on evm.model.C209281.2 gene=EVM%20prediction%20C209281.2 Length=1659 Score = 31.9 bits (34), Expect = 6.8 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 681 AAGCAATTTACAGAAGTAGCGC 702 |||| ||||||||||||| ||| Sbjct 729 AAGCCATTTACAGAAGTATCGC 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28091565945 Database: Salvia_miltiorrhiza.cds Posted date: Jan 8, 2019 5:22 AM Number of letters in database: 37,274,490 Number of sequences in database: 34,575 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2