BLAST Results




BLASTX 2.2.28+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: Ginseng.fa
           59,352 sequences; 22,160,522 total letters



Query= Pg_scaffold0001

Length=700
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Pg_S3515.2                                                          39.3    0.001


> Pg_scaffold0001 on Pg_S3515.2
Length=171

 Score = 39.3 bits (90),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 0/38 (0%)
 Frame = +2

Query  11   PKLQFDNSVFGNSVIVKFRLLIRIAKSSLFRFSVITE*  124
            P   F NSVF NSV  KFRL+ +I + S+ +FSVI E*
Sbjct  134  PNCTFGNSVFSNSVSFKFRLVFQIVELSIIQFSVIIE*  171



Lambda      K        H        a         alpha
   0.318    0.134    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2157967826


  Database: Ginseng.fa
    Posted date:  Jan 8, 2019  6:50 PM
  Number of letters in database: 22,160,522
  Number of sequences in database:  59,352



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 12
Window for multiple hits: 40