BLAST Results
BLASTX 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ginkgo_biloba.pep 41,840 sequences; 16,549,037 total letters Query= Gb_37143 Length=1004 Score E Sequences producing significant alignments: (Bits) Value Gb_37143 648 0.0 Gb_00518 238 9e-74 Gb_22725 169 1e-49 Gb_08289 99.0 5e-25 Gb_33482 70.5 9e-14 Gb_11700 59.7 4e-10 Gb_25210 52.4 2e-07 Gb_38940 45.1 2e-05 Gb_09611 43.1 9e-05 Gb_31881 40.0 3e-04 Gb_26503 34.7 0.063 Gb_37372 28.1 9.3 > Gb_37143 on Gb_37143 Length=335 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/334 (100%), Positives = 334/334 (100%), Gaps = 0/334 (0%) Frame = +1 Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDT 180 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDT Sbjct 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDT 60 Query 181 SAATSPGQWLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELA 360 SAATSPGQWLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELA Sbjct 61 SAATSPGQWLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELA 120 Query 361 RNVSTKNLERVRSLKSHLTRLLARVQKVRdefehlldddedMADLYLTRKHLQNQQLEAS 540 RNVSTKNLERVRSLKSHLTRLLARVQKVRDEFEHLLDDDEDMADLYLTRKHLQNQQLEAS Sbjct 121 RNVSTKNLERVRSLKSHLTRLLARVQKVRDEFEHLLDDDEDMADLYLTRKHLQNQQLEAS 180 Query 541 TTAGGPSGLSITPRLSRLNSRQFSTASFITSVAADENNVEDLEMLLEAYFMQVDGTRNKI 720 TTAGGPSGLSITPRLSRLNSRQFSTASFITSVAADENNVEDLEMLLEAYFMQVDGTRNKI Sbjct 181 TTAGGPSGLSITPRLSRLNSRQFSTASFITSVAADENNVEDLEMLLEAYFMQVDGTRNKI 240 Query 721 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI 900 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI Sbjct 241 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI 300 Query 901 NGVFFPLVGGSLVVCTLLFFVILGYAQWKELLGT 1002 NGVFFPLVGGSLVVCTLLFFVILGYAQWKELLGT Sbjct 301 NGVFFPLVGGSLVVCTLLFFVILGYAQWKELLGT 334 > Gb_37143 on Gb_00518 Length=468 Score = 238 bits (608), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 165/365 (45%), Positives = 220/365 (60%), Gaps = 33/365 (9%) Frame = +1 Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSP-------SRIQECN--- 150 +VVNLE I+ I+TA+EV LL+ L VL +V +L+++L +++ S Q + Sbjct 101 IVVNLEQIRCIITADEVLLLNSLDNYVLQYVAELQRRLTMRNDMISNMWHSAEQGSSRFP 160 Query 151 -QINRQE-RNDTSAATSPGQWLPVPEAAEGLQ----RELPFEFRVLEIALEVVCTYLDSN 312 Q RQE R+DT + + G AE LPFEFR LE+ALE CT+LD+ Sbjct 161 LQSARQEFRDDTISGIAQGSQQRSINYAEFFSGPSADNLPFEFRALEVALEAACTFLDTQ 220 Query 313 VAELEREAYPVLDELARNVSTKNLERVRSLKSHLTRLLARVQKVRdefehlldddedMAD 492 ELE EAYPVLDEL +ST NLERVR LKS L L RVQKVRDE E L+DDD DMA+ Sbjct 221 ATELEIEAYPVLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAE 280 Query 493 LYLTRKH-------LQNQQLEASTT--AGGPSGLSITPRLSRLNSRQFSTA-----SFIT 630 +YLT K ++Q L T+ AGG ++P S SR+ S Sbjct 281 MYLTEKKERMEASFYRDQSLVGYTSVGAGGSISAPVSPVCSPPESRKLEKTLSLARSRHE 340 Query 631 SVAADENN---VEDLEMLLEAYFMQVDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQ 801 S ENN +E+LEMLLEAYF+ +D T NK+ S++EYIDDTED++NIQLDN RN+LIQ Sbjct 341 STRGSENNDEHIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQ 400 Query 802 LQLTLTIASFVIALATLIAGIFGMNIPCPLYSINGVFFPLVGGSLVVCTLLFFVILGYAQ 981 +L LT A+FV+A+ ++AG+FGMNIP L+ F ++ + VV L+FF L Y + Sbjct 401 FELLLTTATFVVAIFGVVAGVFGMNIPIDLFEEPKAFKWVLIITGVVGGLIFFSFLWYFK 460 Query 982 WKELL 996 + L+ Sbjct 461 HRRLM 465 > Gb_37143 on Gb_22725 Length=250 Score = 169 bits (429), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 143/222 (64%), Gaps = 14/222 (6%) Frame = +1 Query 271 EIALEVVCTYLDSNVAELEREAYPVLDELARNVSTKNLERVRSLKSHLTRLLARVQKVRd 450 E++L ++C+ ELE EAYP+LDEL +ST NLERVR LKS L L RVQKVR+ Sbjct 16 ELSLNIICSPHREPATELEIEAYPLLDELISKISTLNLERVRRLKSRLVALTRRVQKVRE 75 Query 451 efehlldddedMADLYLTRK---------HLQNQQLEASTTAGGPSGLSITPRLSRLNSR 603 E E L+DDD DMA++YLT K Q+ S AGG ++P S SR Sbjct 76 EIEQLMDDDGDMAEMYLTEKKERMDTTFCREQSSVGYTSVGAGGSVSAPVSPVFSPTESR 135 Query 604 QFSTASFITSV-----AADENNVEDLEMLLEAYFMQVDGTRNKILSVREYIDDTEDYVNI 768 + ++ + + ++E+LEMLLEAYF+ +D T NK+ S++EYIDDTED++NI Sbjct 136 NLEKSLSMSRIRHESSDSSSEHIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINI 195 Query 769 QLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLY 894 QLDN RN+LIQ +L LT A+FV+A+ ++AG+FGMNIP L+ Sbjct 196 QLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNIPLDLF 237 > Gb_37143 on Gb_08289 Length=101 Score = 99.0 bits (245), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 49/95 (52%), Positives = 69/95 (73%), Gaps = 1/95 (1%) Frame = +1 Query 721 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI 900 +REYIDDTEDY+NIQLDN RN+LIQL+L L+ A+ V+++ +L+AGIFGMNIP P Sbjct 6 FQLREYIDDTEDYINIQLDNHRNQLIQLELLLSSATVVVSIYSLVAGIFGMNIPYPWNDN 65 Query 901 NGVFFP-LVGGSLVVCTLLFFVILGYAQWKELLGT 1002 +G F +V + + C +F +I+ YA +K L+GT Sbjct 66 HGYIFKWVVVLTGIFCGTIFSLIMTYAHYKGLIGT 100 > Gb_37143 on Gb_33482 Length=256 Score = 70.5 bits (171), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 44/117 (38%), Positives = 63/117 (54%), Gaps = 12/117 (10%) Frame = +1 Query 25 KAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDTSAATSPGQ 204 +AIV EV L +P + V+P +++L ++L S + + + R + N GQ Sbjct 75 RAIVLNLEVLLRNPGDEYVIPILEELCRRLPGGSTGQRADHSGDGRDQSN--------GQ 126 Query 205 WLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELARNVST 375 EA G + E PFEFR LE+ALE +C++LD+ ELE AYP LDEL T Sbjct 127 Q----EADAGDEDESPFEFRALEVALEAICSFLDARTTELETAAYPALDELTSKRKT 179 > Gb_37143 on Gb_11700 Length=237 Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 10/113 (9%) Frame = +1 Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKS---------PSRIQECNQ 153 +VVNLE I+ I+TA+EV LL+ + VL +V +L+++L KS P Sbjct 101 IVVNLEQIRCIITADEVLLLNSIDSYVLQYVAELQRRLTTKSGMGGGKMWHPGTRSSTQD 160 Query 154 INRQERNDTSAATSPGQWLPVPEAAEGLQRE-LPFEFRVLEIALEVVCTYLDS 309 + + S G + + G + LPFEFR LE+ALE CT+LDS Sbjct 161 LKMDVISGIEQPPSQGGSMNYTDLFSGSSADNLPFEFRALEVALEAACTFLDS 213 > Gb_37143 on Gb_25210 Length=510 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 47/84 (56%), Gaps = 0/84 (0%) Frame = +1 Query 745 DTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSINGVFFPLV 924 + ED + + L ++R E+ +L+L L +++F AL L+AGIFGMN+ L F+ Sbjct 426 EMEDSIAVNLSSRRLEVSRLELLLQVSTFCTALGALVAGIFGMNLKSYLEEHVFAFWFTT 485 Query 925 GGSLVVCTLLFFVILGYAQWKELL 996 G + LF V+ Y + +++L Sbjct 486 AGIMFGAIALFVVMYSYLKGRKIL 509 > Gb_37143 on Gb_38940 Length=196 Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 45/79 (57%), Gaps = 0/79 (0%) Frame = +1 Query 697 VDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMN 876 VD + +R+ I+ ++ + LD RN++I++ L +++A+ +LAT+ A FGMN Sbjct 60 VDDAGGVVEELRKGIESAQEVWELTLDTTRNKIIRMNLFISMAALSFSLATVPASFFGMN 119 Query 877 IPCPLYSINGVFFPLVGGS 933 + L + F+ +VG + Sbjct 120 VISGLEASPRAFYIIVGAT 138 > Gb_37143 on Gb_09611 Length=178 Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 0/38 (0%) Frame = +1 Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQL 114 +V+N+E IKAI+TA+EVFLL+ AV P V L+Q+L Sbjct 90 IVINVEHIKAIITAQEVFLLNSTDPAVAPVVTNLQQRL 127 > Gb_37143 on Gb_31881 Length=74 Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats. Identities = 33/58 (57%), Positives = 42/58 (72%), Gaps = 1/58 (2%) Frame = +1 Query 337 YPVLDELARNVSTKNLERVRSLKSHLTRLLARVQKVRdefehlldddedMADLYLTRK 510 YP LDEL +S+ NL+++ S KS +TR+ VQKVR E E LDDD+DM DLYL+RK Sbjct 2 YPTLDELTSKISSHNLDQILS-KSAMTRVTICVQKVRYELEKNLDDDDDMDDLYLSRK 58 > Gb_37143 on Gb_26503 Length=197 Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 0/30 (0%) Frame = +1 Query 229 EGLQRELPFEFRVLEIALEVVCTYLDSNVA 318 EG + LPFEFR LE LE C+ L+ V Sbjct 102 EGGPKVLPFEFRALEACLEAACSCLEMEVG 131 > Gb_37143 on Gb_37372 Length=197 Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust. Identities = 20/47 (43%), Positives = 26/47 (55%), Gaps = 4/47 (9%) Frame = -2 Query 994 VVLSTGHILILQRKATYIQP---GYLQLKEKIHHLYYIVDKEYSFQK 863 VV S G IL R TYI P G+L + IHHL++I+ +S K Sbjct 17 VVTSDGRILSNPRH-TYITPPGHGFLPRETAIHHLHHILPLVHSALK 62 Lambda K H a alpha 0.318 0.134 0.401 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 2849274824 Database: Ginkgo_biloba.pep Posted date: Jan 8, 2019 6:33 PM Number of letters in database: 16,549,037 Number of sequences in database: 41,840 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 12 Window for multiple hits: 40