BLAST Results
BLASTP 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Ginkgo_biloba.pep 41,840 sequences; 16,549,037 total letters Query= Gb_37143 Length=335 Score E Sequences producing significant alignments: (Bits) Value Gb_37143 680 0.0 Gb_00518 260 3e-82 Gb_22725 190 1e-57 Gb_08289 103 1e-26 Gb_33482 69.7 2e-13 Gb_11700 59.7 4e-10 Gb_25210 55.8 2e-08 Gb_31881 45.1 6e-06 Gb_38940 45.4 2e-05 Gb_09611 43.5 6e-05 Gb_26503 34.7 0.067 Gb_09060 30.0 3.1 Gb_21527 30.0 3.1 > Gb_37143 on Gb_37143 Length=335 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDT 60 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDT Sbjct 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDT 60 Query 61 SAATSPGQWLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELA 120 SAATSPGQWLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELA Sbjct 61 SAATSPGQWLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELA 120 Query 121 RNVSTKNLERVRSLKSHLTRLLARVQKVRDEFEHLLDDDEDMADLYLTRKHLQNQQLEAS 180 RNVSTKNLERVRSLKSHLTRLLARVQKVRDEFEHLLDDDEDMADLYLTRKHLQNQQLEAS Sbjct 121 RNVSTKNLERVRSLKSHLTRLLARVQKVRDEFEHLLDDDEDMADLYLTRKHLQNQQLEAS 180 Query 181 TTAGGPSGLSITPRLSRLNSRQFSTASFITSVAADENNVEDLEMLLEAYFMQVDGTRNKI 240 TTAGGPSGLSITPRLSRLNSRQFSTASFITSVAADENNVEDLEMLLEAYFMQVDGTRNKI Sbjct 181 TTAGGPSGLSITPRLSRLNSRQFSTASFITSVAADENNVEDLEMLLEAYFMQVDGTRNKI 240 Query 241 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI 300 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI Sbjct 241 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI 300 Query 301 NGVFFPLVGGSLVVCTLLFFVILGYAQWKELLGT* 335 NGVFFPLVGGSLVVCTLLFFVILGYAQWKELLGT* Sbjct 301 NGVFFPLVGGSLVVCTLLFFVILGYAQWKELLGT* 335 > Gb_37143 on Gb_00518 Length=468 Score = 260 bits (665), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 165/365 (45%), Positives = 220/365 (60%), Gaps = 33/365 (9%) Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSP-------SRIQECN--- 50 +VVNLE I+ I+TA+EV LL+ L VL +V +L+++L +++ S Q + Sbjct 101 IVVNLEQIRCIITADEVLLLNSLDNYVLQYVAELQRRLTMRNDMISNMWHSAEQGSSRFP 160 Query 51 -QINRQE-RNDTSAATSPGQWLPVPEAAEGLQ----RELPFEFRVLEIALEVVCTYLDSN 104 Q RQE R+DT + + G AE LPFEFR LE+ALE CT+LD+ Sbjct 161 LQSARQEFRDDTISGIAQGSQQRSINYAEFFSGPSADNLPFEFRALEVALEAACTFLDTQ 220 Query 105 VAELEREAYPVLDELARNVSTKNLERVRSLKSHLTRLLARVQKVRDEFEHLLDDDEDMAD 164 ELE EAYPVLDEL +ST NLERVR LKS L L RVQKVRDE E L+DDD DMA+ Sbjct 221 ATELEIEAYPVLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAE 280 Query 165 LYLTRKH-------LQNQQLEASTT--AGGPSGLSITPRLSRLNSRQFSTA-----SFIT 210 +YLT K ++Q L T+ AGG ++P S SR+ S Sbjct 281 MYLTEKKERMEASFYRDQSLVGYTSVGAGGSISAPVSPVCSPPESRKLEKTLSLARSRHE 340 Query 211 SVAADENN---VEDLEMLLEAYFMQVDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQ 267 S ENN +E+LEMLLEAYF+ +D T NK+ S++EYIDDTED++NIQLDN RN+LIQ Sbjct 341 STRGSENNDEHIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQ 400 Query 268 LQLTLTIASFVIALATLIAGIFGMNIPCPLYSINGVFFPLVGGSLVVCTLLFFVILGYAQ 327 +L LT A+FV+A+ ++AG+FGMNIP L+ F ++ + VV L+FF L Y + Sbjct 401 FELLLTTATFVVAIFGVVAGVFGMNIPIDLFEEPKAFKWVLIITGVVGGLIFFSFLWYFK 460 Query 328 WKELL 332 + L+ Sbjct 461 HRRLM 465 > Gb_37143 on Gb_22725 Length=250 Score = 190 bits (482), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 143/222 (64%), Gaps = 14/222 (6%) Query 91 EIALEVVCTYLDSNVAELEREAYPVLDELARNVSTKNLERVRSLKSHLTRLLARVQKVRD 150 E++L ++C+ ELE EAYP+LDEL +ST NLERVR LKS L L RVQKVR+ Sbjct 16 ELSLNIICSPHREPATELEIEAYPLLDELISKISTLNLERVRRLKSRLVALTRRVQKVRE 75 Query 151 EFEHLLDDDEDMADLYLTRK---------HLQNQQLEASTTAGGPSGLSITPRLSRLNSR 201 E E L+DDD DMA++YLT K Q+ S AGG ++P S SR Sbjct 76 EIEQLMDDDGDMAEMYLTEKKERMDTTFCREQSSVGYTSVGAGGSVSAPVSPVFSPTESR 135 Query 202 QFSTASFITSV-----AADENNVEDLEMLLEAYFMQVDGTRNKILSVREYIDDTEDYVNI 256 + ++ + + ++E+LEMLLEAYF+ +D T NK+ S++EYIDDTED++NI Sbjct 136 NLEKSLSMSRIRHESSDSSSEHIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINI 195 Query 257 QLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLY 298 QLDN RN+LIQ +L LT A+FV+A+ ++AG+FGMNIP L+ Sbjct 196 QLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNIPLDLF 237 > Gb_37143 on Gb_08289 Length=101 Score = 103 bits (256), Expect = 1e-26, Method: Composition-based stats. Identities = 50/96 (52%), Positives = 70/96 (73%), Gaps = 1/96 (1%) Query 241 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSI 300 +REYIDDTEDY+NIQLDN RN+LIQL+L L+ A+ V+++ +L+AGIFGMNIP P Sbjct 6 FQLREYIDDTEDYINIQLDNHRNQLIQLELLLSSATVVVSIYSLVAGIFGMNIPYPWNDN 65 Query 301 NGVFFP-LVGGSLVVCTLLFFVILGYAQWKELLGT* 335 +G F +V + + C +F +I+ YA +K L+GT* Sbjct 66 HGYIFKWVVVLTGIFCGTIFSLIMTYAHYKGLIGT* 101 > Gb_37143 on Gb_33482 Length=256 Score = 69.7 bits (169), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/117 (38%), Positives = 63/117 (54%), Gaps = 12/117 (10%) Query 9 KAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKSPSRIQECNQINRQERNDTSAATSPGQ 68 +AIV EV L +P + V+P +++L ++L S + + + R + N GQ Sbjct 75 RAIVLNLEVLLRNPGDEYVIPILEELCRRLPGGSTGQRADHSGDGRDQSN--------GQ 126 Query 69 WLPVPEAAEGLQRELPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELARNVST 125 EA G + E PFEFR LE+ALE +C++LD+ ELE AYP LDEL T Sbjct 127 Q----EADAGDEDESPFEFRALEVALEAICSFLDARTTELETAAYPALDELTSKRKT 179 > Gb_37143 on Gb_11700 Length=237 Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 10/113 (9%) Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQLRLKS---------PSRIQECNQ 51 +VVNLE I+ I+TA+EV LL+ + VL +V +L+++L KS P Sbjct 101 IVVNLEQIRCIITADEVLLLNSIDSYVLQYVAELQRRLTTKSGMGGGKMWHPGTRSSTQD 160 Query 52 INRQERNDTSAATSPGQWLPVPEAAEGLQRE-LPFEFRVLEIALEVVCTYLDS 103 + + S G + + G + LPFEFR LE+ALE CT+LDS Sbjct 161 LKMDVISGIEQPPSQGGSMNYTDLFSGSSADNLPFEFRALEVALEAACTFLDS 213 > Gb_37143 on Gb_25210 Length=510 Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/250 (21%), Positives = 102/250 (41%), Gaps = 23/250 (9%) Query 83 LPFEFRVLEIALEVVCTYLDSNVAELEREAYPVLDELARNVSTKNLERVRSLKSHLTRLL 142 +PFE V+E AL L+ + E+E +L+ L ++ LE +R K L L Sbjct 283 MPFELEVVEAALVSTTQRLERKLMEVEPRVVALLEVLPNRLTADVLEELRLSKQALVELG 342 Query 143 ARVQKVRDEFEHLLDDDEDMADLYLTRKHLQNQQLEASTTAGGPSGLSITPRLSRLNSRQ 202 ++ +R LL+ ++ + + + ++ + P +Q Sbjct 343 SKAGALRQMLLELLEHPHEIRRMTVMGRSCVVRKGDGLVECSIPL------------DKQ 390 Query 203 FSTASFITSVAADENNVEDLEMLLEAYFMQVDGTRNKILSVREYIDDTEDYVNIQLDNQR 262 + EN Y + + + + + + ED + + L ++R Sbjct 391 IAEEEEEEIEMLLEN-----------YLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRR 439 Query 263 NELIQLQLTLTIASFVIALATLIAGIFGMNIPCPLYSINGVFFPLVGGSLVVCTLLFFVI 322 E+ +L+L L +++F AL L+AGIFGMN+ L F+ G + LF V+ Sbjct 440 LEVSRLELLLQVSTFCTALGALVAGIFGMNLKSYLEEHVFAFWFTTAGIMFGAIALFVVM 499 Query 323 LGYAQWKELL 332 Y + +++L Sbjct 500 YSYLKGRKIL 509 > Gb_37143 on Gb_31881 Length=74 Score = 45.1 bits (105), Expect = 6e-06, Method: Composition-based stats. Identities = 33/58 (57%), Positives = 42/58 (72%), Gaps = 1/58 (2%) Query 113 YPVLDELARNVSTKNLERVRSLKSHLTRLLARVQKVRDEFEHLLDDDEDMADLYLTRK 170 YP LDEL +S+ NL+++ S KS +TR+ VQKVR E E LDDD+DM DLYL+RK Sbjct 2 YPTLDELTSKISSHNLDQILS-KSAMTRVTICVQKVRYELEKNLDDDDDMDDLYLSRK 58 > Gb_37143 on Gb_38940 Length=196 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 45/79 (57%), Gaps = 0/79 (0%) Query 233 VDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMN 292 VD + +R+ I+ ++ + LD RN++I++ L +++A+ +LAT+ A FGMN Sbjct 60 VDDAGGVVEELRKGIESAQEVWELTLDTTRNKIIRMNLFISMAALSFSLATVPASFFGMN 119 Query 293 IPCPLYSINGVFFPLVGGS 311 + L + F+ +VG + Sbjct 120 VISGLEASPRAFYIIVGAT 138 > Gb_37143 on Gb_09611 Length=178 Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 0/38 (0%) Query 1 MVVNLEFIKAIVTAEEVFLLDPLSQAVLPFVDQLRQQL 38 +V+N+E IKAI+TA+EVFLL+ AV P V L+Q+L Sbjct 90 IVINVEHIKAIITAQEVFLLNSTDPAVAPVVTNLQQRL 127 > Gb_37143 on Gb_26503 Length=197 Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 0/30 (0%) Query 77 EGLQRELPFEFRVLEIALEVVCTYLDSNVA 106 EG + LPFEFR LE LE C+ L+ V Sbjct 102 EGGPKVLPFEFRALEACLEAACSCLEMEVG 131 > Gb_37143 on Gb_09060 Length=903 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 13/21 (62%), Positives = 16/21 (76%), Gaps = 1/21 (5%) Query 275 ASFVIALATLIAGIFGMNIPC 295 AS ALA LI GIFG+++PC Sbjct 31 ASVAFALAKLI-GIFGLHLPC 50 > Gb_37143 on Gb_21527 Length=658 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 0/39 (0%) Query 254 VNIQLDNQRNELIQLQLTLTIASFVIALATLIAGIFGMN 292 +++ DNQ I+++LT+T+ FV+ + + +FG++ Sbjct 265 TDMEEDNQEACSIRVKLTVTVWDFVLPVTPSLPAVFGIS 303 Lambda K H a alpha 0.322 0.137 0.386 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 2861556181 Database: Ginkgo_biloba.pep Posted date: Jan 8, 2019 6:33 PM Number of letters in database: 16,549,037 Number of sequences in database: 41,840 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40