BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepidium_meyenii.cds 96,417 sequences; 111,736,531 total letters Query= evm.model.C3397927.1 locus=C3397927:14:175:+ Length=162 Score E Sequences producing significant alignments: (Bits) Value evm.model.C3397927.1 locus=C3397927:14:175:+ 293 7e-79 evm.model.C3393219.1 locus=C3393219:14:175:+ 288 3e-77 evm.model.C3664925.1 locus=C3664925:8:169:+ 284 4e-76 evm.model.scaffold3166.1 locus=scaffold3166:4151:9049:- 255 2e-67 evm.model.scaffold2156.1 locus=scaffold2156:13402:17580:+ 255 2e-67 evm.model.scaffold498.134 locus=scaffold498:646081:648505:- 123 7e-28 evm.model.scaffold2156.3 locus=scaffold2156:8625:10607:+ 84.2 6e-16 > evm.model.C3397927.1 on evm.model.C3397927.1 locus=C3397927:14:175:+ Length=162 Score = 293 bits (324), Expect = 7e-79 Identities = 162/162 (100%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 Query 61 CGCACCGGACACCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGCACCGGACACCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 Query 121 AGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA 162 > evm.model.C3397927.1 on evm.model.C3393219.1 locus=C3393219:14:175:+ Length=162 Score = 288 bits (318), Expect = 3e-77 Identities = 161/162 (99%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 Query 61 CGCACCGGACACCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGCACCGGACACCAGGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 Query 121 AGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA 162 > evm.model.C3397927.1 on evm.model.C3664925.1 locus=C3664925:8:169:+ Length=162 Score = 284 bits (314), Expect = 4e-76 Identities = 160/162 (99%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 Query 61 CGCACCGGACACCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGCACCGGACACCACGCGACATGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 Query 121 AGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA 162 > evm.model.C3397927.1 on evm.model.scaffold3166.1 locus=scaffold3166:4151:9049:- Length=2289 Score = 255 bits (282), Expect = 2e-67 Identities = 143/144 (99%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 493 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 552 Query 61 CGCACCGGACACCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 CGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 612 Query 121 AGCCGTTTCCAGGGTGGGCAGGCT 144 |||||||||||||||||||||||| Sbjct 613 AGCCGTTTCCAGGGTGGGCAGGCT 636 > evm.model.C3397927.1 on evm.model.scaffold2156.1 locus=scaffold2156:13402:17580:+ Length=2173 Score = 255 bits (282), Expect = 2e-67 Identities = 143/144 (99%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 ATGAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGG 349 Query 61 CGCACCGGACACCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 350 CGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTG 409 Query 121 AGCCGTTTCCAGGGTGGGCAGGCT 144 |||||||||||||||||||||||| Sbjct 410 AGCCGTTTCCAGGGTGGGCAGGCT 433 > evm.model.C3397927.1 on evm.model.scaffold498.134 locus=scaffold498:646081:648505:- Length=1308 Score = 123 bits (136), Expect = 7e-28 Identities = 70/71 (99%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 72 CCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCA 131 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1166 CCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCA 1107 Query 132 GGGTGGGCAGG 142 ||||||||||| Sbjct 1106 GGGTGGGCAGG 1096 > evm.model.C3397927.1 on evm.model.scaffold2156.3 locus=scaffold2156:8625:10607:+ Length=577 Score = 84.2 bits (92), Expect = 6e-16 Identities = 99/133 (74%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 3 GAGTACGACCGGGCGTGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCG 62 || ||||||| |||||| | | || ||| |||||||||||||| || || | ||| Sbjct 439 GAATACGACCTGGCGTGAGAATTATTCCTTCCCGCGGATTTTCAAGGGACGTCGAGAGCG 498 Query 63 CACCGGACACCAAGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAG 122 |||||||| ||| || |||| | |||||||||||| | |||||| |||||| | Sbjct 499 CACCGGAC-CCAGCAGAGGTGCTGGGCTCTTCCAGCCATTAAACCCTAGCTCCGGACAAA 557 Query 123 CCGTTTCCAGGGT 135 ||| || |||||| Sbjct 558 CCGATTTCAGGGT 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14855237704 Database: Lepidium_meyenii.cds Posted date: Jan 8, 2019 3:56 PM Number of letters in database: 111,736,531 Number of sequences in database: 96,417 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2