BLASTN 2.2.28+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: Glycyrrhiza_uralensis.fa
           12,528 sequences; 378,856,821 total letters



Query= Scaffold00001

Length=660
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Scaffold00001                                                       1187    0.0  
  Scaffold00021                                                       51.8    6e-05
  Scaffold01007                                                       46.4    0.003
  Scaffold01503                                                       44.6    0.009
  Scaffold00067                                                       44.6    0.009
  Scaffold01467                                                       42.8    0.032
  Scaffold00654                                                       42.8    0.032
  Scaffold00015                                                       42.8    0.032
  Scaffold02875                                                       41.0    0.11 
  Scaffold02143                                                       41.0    0.11 
  Scaffold02141                                                       41.0    0.11 
  Scaffold01390                                                       41.0    0.11 
  Scaffold00359                                                       41.0    0.11 
  Scaffold00038                                                       41.0    0.11 
  Scaffold00002                                                       41.0    0.11 
  Scaffold09579                                                       39.2    0.39 
  Scaffold05374                                                       39.2    0.39 
  Scaffold05216                                                       39.2    0.39 
  Scaffold03559                                                       39.2    0.39 
  Scaffold01515                                                       39.2    0.39 
  Scaffold01105                                                       39.2    0.39 
  Scaffold01090                                                       39.2    0.39 
  Scaffold01032                                                       39.2    0.39 
  Scaffold00928                                                       39.2    0.39 
  Scaffold00817                                                       39.2    0.39 
  Scaffold00798                                                       39.2    0.39 
  Scaffold00686                                                       39.2    0.39 
  Scaffold00629                                                       39.2    0.39 
  Scaffold00595                                                       39.2    0.39 
  Scaffold00273                                                       39.2    0.39 
  Scaffold00169                                                       39.2    0.39 
  Scaffold00154                                                       39.2    0.39 
  Scaffold00102                                                       39.2    0.39 
  Scaffold00069                                                       39.2    0.39 
  Scaffold00012                                                       39.2    0.39 
  Scaffold09557                                                       37.4    1.4  
  Scaffold06592                                                       37.4    1.4  
  Scaffold03767                                                       37.4    1.4  
  Scaffold02673                                                       37.4    1.4  
  Scaffold01916                                                       37.4    1.4  
  Scaffold01681                                                       37.4    1.4  
  Scaffold01493                                                       37.4    1.4  
  Scaffold00679                                                       37.4    1.4  
  Scaffold00617                                                       37.4    1.4  
  Scaffold00615                                                       37.4    1.4  
  Scaffold00609                                                       37.4    1.4  
  Scaffold00541                                                       37.4    1.4  
  Scaffold00462                                                       37.4    1.4  
  Scaffold00404                                                       37.4    1.4  
  Scaffold00318                                                       37.4    1.4  


> Scaffold00001
Length=1116388

 Score = 1187 bits (1316),  Expect = 0.0
 Identities = 660/660 (100%), Gaps = 0/660 (0%)
 Strand=Plus/Plus

Query  1    TTTTTCCAAATATTTACATATATACACTTATGTCATATCAAATAAGTTTTTCTAAACACT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    TTTTTCCAAATATTTACATATATACACTTATGTCATATCAAATAAGTTTTTCTAAACACT  60

Query  61   TTGCTTAAACATAAAACAAAATTAAGGGTGaaaaaaaTTGCGTTTCTTTTACATGCCATG  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   TTGCTTAAACATAAAACAAAATTAAGGGTGAAAAAAATTGCGTTTCTTTTACATGCCATG  120

Query  121  ACATCTTTTTAGTCTACTTATTTCCAGTGTCCACTCATATCCTTTTCCAATTATTTCTTT  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  ACATCTTTTTAGTCTACTTATTTCCAGTGTCCACTCATATCCTTTTCCAATTATTTCTTT  180

Query  181  ACTCTCTCTCCTGTTCATTGTAGCACTCTACAAGTTGCCAAAGGAGAAGGAGTATATATC  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  ACTCTCTCTCCTGTTCATTGTAGCACTCTACAAGTTGCCAAAGGAGAAGGAGTATATATC  240

Query  241  AACaaaaaaaaaaGGGAGAAGGAGTATAATGCATTTTCCCTTTTCCCACAACACCCAATT  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  AACAAAAAAAAAAGGGAGAAGGAGTATAATGCATTTTCCCTTTTCCCACAACACCCAATT  300

Query  301  AAATAAATAAAACTGGTGAAAGGGTATTAAGTCTCTTTATTTGCTTCTGGGCTCTATTCC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  AAATAAATAAAACTGGTGAAAGGGTATTAAGTCTCTTTATTTGCTTCTGGGCTCTATTCC  360

Query  361  TTCAGCTTCATGCATAGCTTTTTATTTCTTGGGGGGAAGCTTGTCTTACTTTATCTGGTT  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  TTCAGCTTCATGCATAGCTTTTTATTTCTTGGGGGGAAGCTTGTCTTACTTTATCTGGTT  420

Query  421  TACTATTTGATTTGCTGGCACTTTCTGCTTCACAGGTTTCCGTCTCAYTCTACTTCTGGA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  TACTATTTGATTTGCTGGCACTTTCTGCTTCACAGGTTTCCGTCTCAYTCTACTTCTGGA  480

Query  481  GTTTAACTGGTACTAATGACAAGTTTTAGTTTACTTCACTTTTTTCATGCCCCCTTTGTT  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  GTTTAACTGGTACTAATGACAAGTTTTAGTTTACTTCACTTTTTTCATGCCCCCTTTGTT  540

Query  541  CCATCACCAGCATGTCCCTCACTGAATCTTTACTATATTTCCTCATTTTCCAGGATTTGA  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  CCATCACCAGCATGTCCCTCACTGAATCTTTACTATATTTCCTCATTTTCCAGGATTTGA  600

Query  601  AAAAATGGGAGAAAGTGCTTTGTTCTCTCTGTAGAATTTGGTAGAGAAAGATAACATTTT  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  601  AAAAATGGGAGAAAGTGCTTTGTTCTCTCTGTAGAATTTGGTAGAGAAAGATAACATTTT  660


> Scaffold00021
Length=601924

 Score = 51.8 bits (56),  Expect = 6e-05
 Identities = 42/50 (84%), Gaps = 2/50 (4%)
 Strand=Plus/Plus

Query  1       TTTTTCCAAATATTTACATATATACACTTATGTCATATCAAATAAGTTTT  50
               ||||| |||| |||||  |||| |||||||||| |||  |||||||||||
Sbjct  334241  TTTTTTCAAACATTTA--TATAAACACTTATGTAATAAAAAATAAGTTTT  334288


> Scaffold01007
Length=98268

 Score = 46.4 bits (50),  Expect = 0.003
 Identities = 39/46 (85%), Gaps = 4/46 (9%)
 Strand=Plus/Minus

Query  1      TTTTTCCAAATATTTACATATATACACTTATGTCATATCAAATAAG  46
              |||||||||||| ||||||| ||  |||||||||  || |||||||
Sbjct  92184  TTTTTCCAAATACTTACATAAAT--ACTTATGTC--ATGAAATAAG  92143


> Scaffold01503
Length=68883

 Score = 44.6 bits (48),  Expect = 0.009
 Identities = 46/62 (74%), Gaps = 10/62 (16%)
 Strand=Plus/Plus

Query  3      TTTCCAAATATTTACATATATACACTTATGTCATA--------TCAAATAAGTTTTTCTA  54
              |||||||||||||  |||||  || |||| || ||        |||||||||| ||||||
Sbjct  14956  TTTCCAAATATTT--ATATAARCATTTATRTCGTAAGATAAACTCAAATAAGTCTTTCTA  15013

Query  55     AA  56
              ||
Sbjct  15014  AA  15015


> Scaffold00067
Length=429216

 Score = 44.6 bits (48),  Expect = 0.009
 Identities = 39/48 (81%), Gaps = 2/48 (4%)
 Strand=Plus/Minus

Query  1       TTTTTCCAAATATTTACATATATAC--ACTTATGTCATATCAAATAAG  46
               |||||||||||| |||||||  |||  |||||| ||||| |  |||||
Sbjct  205377  TTTTTCCAAATACTTACATAAGTACGTACTTATTTCATAACTCATAAG  205330


 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  233     TATATATCAACaaaaaaaaaa  253
               |||||||||||||||||||||
Sbjct  232044  TATATATCAACAAAAAAAAAA  232064


 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 36/46 (78%), Gaps = 3/46 (7%)
 Strand=Plus/Plus

Query  575   ATATTTCCTCATTTTC---CAGGATTTGAAAAAATGGGAGAAAGTG  617
             |||||| ||||| | |   || |||||| |||||||||||  ||||
Sbjct  6377  ATATTTTCTCATGTGCACACATGATTTGTAAAAATGGGAGTGAGTG  6422


> Scaffold01467
Length=70386

 Score = 42.8 bits (46),  Expect = 0.032
 Identities = 31/35 (89%), Gaps = 2/35 (6%)
 Strand=Plus/Plus

Query  38     TCAAATAAGTTTTTCTAAACACTTTGCTTAAACAT  72
              ||||||||||||||| |||||| |  |||||||||
Sbjct  55683  TCAAATAAGTTTTTCCAAACACAT--CTTAAACAT  55715


> Scaffold00654
Length=133599

 Score = 42.8 bits (46),  Expect = 0.032
 Identities = 31/35 (89%), Gaps = 1/35 (3%)
 Strand=Plus/Plus

Query  47      TTTTTCTAAACACTTTGCTTAAACATAAAACAAAA  81
               ||||| |||||| || ||||||| |||||||||||
Sbjct  113493  TTTTTTTAAACAATT-GCTTAAAAATAAAACAAAA  113526


> Scaffold00015
Length=662860

 Score = 42.8 bits (46),  Expect = 0.032
 Identities = 38/46 (83%), Gaps = 4/46 (9%)
 Strand=Plus/Minus

Query  220     AAAGGAGAAGGAGTATATATCAACaaaaaaaaaa-GGGAGAAGGAG  264
               || ||||||||| |   | |||| |||||||||| |||||||||||
Sbjct  180603  AAGGGAGAAGGATT---TGTCAAAAAAAAAAAAAAGGGAGAAGGAG  180561


> Scaffold02875
Length=32753

 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 41/53 (77%), Gaps = 8/53 (15%)
 Strand=Plus/Minus

Query  14     TTACATATATACACTTATGTCATA-----TCAAATAA---GTTTTTCTAAACA  58
              ||| | ||| ||||||||||||||     | ||||||   |||||||||||||
Sbjct  27048  TTATACATAAACACTTATGTCATAAGTGCTTAAATAAACTGTTTTTCTAAACA  26996


> Scaffold02143
Length=47900

 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 41/53 (77%), Gaps = 8/53 (15%)
 Strand=Plus/Minus

Query  14     TTACATATATACACTTATGTCATA-----TCAAATAA---GTTTTTCTAAACA  58
              ||| | ||| ||||||||||||||     | ||||||   |||||||||||||
Sbjct  42841  TTATACATAAACACTTATGTCATAAGTGCTTAAATAAACTGTTTTTCTAAACA  42789


> Scaffold02141
Length=47932

 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 41/53 (77%), Gaps = 8/53 (15%)
 Strand=Plus/Minus

Query  14     TTACATATATACACTTATGTCATA-----TCAAATAAG---TTTTTCTAAACA  58
              ||| ||||| ||||||||||||||     | |||||||   ||| ||||||||
Sbjct  21411  TTATATATAAACACTTATGTCATAAACGCTTAAATAAGCTATTTATCTAAACA  21359


> Scaffold01390
Length=73447

 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 27/29 (93%), Gaps = 1/29 (3%)
 Strand=Plus/Plus

Query  162    CTTTTCCAATTATTTCTTTACTCTCTCTC  190
              ||||||||||||||||| | |||||||||
Sbjct  37481  CTTTTCCAATTATTTCTCT-CTCTCTCTC  37508


 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 27/29 (93%), Gaps = 1/29 (3%)
 Strand=Plus/Minus

Query  162    CTTTTCCAATTATTTCTTTACTCTCTCTC  190
              ||||||||||||||||| | |||||||||
Sbjct  38312  CTTTTCCAATTATTTCTCT-CTCTCTCTC  38285


> Scaffold00359
Length=182516

 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 27/30 (90%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  173     ATTTCTTTACTCTCTCTCCTGTTCATTGTA  202
               ||||||||||| || || ||||||||||||
Sbjct  104844  ATTTCTTTACTGTCACTTCTGTTCATTGTA  104873


> Scaffold00038
Length=515813

 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 54/74 (73%), Gaps = 11/74 (15%)
 Strand=Plus/Minus

Query  4      TTCCAAATATTTACATATATACACTTATGTCATA--------TCAAATAAGTTTTTCTAA  55
              || |||||| ||||||   | |  ||||||||||        ||||||||||||||| ||
Sbjct  70506  TTTCAAATACTTACATKAGTGC--TTATGTCATAAGATAAGCTCAAATAAGTTTTTCCAA  70449

Query  56     ACACTTTGCTTAAA  69
              ||||  | ||||||
Sbjct  70448  ACACACT-CTTAAA  70436


 Score = 35.6 bits (38),  Expect = 4.7
 Identities = 21/22 (95%), Gaps = 0/22 (0%)
 Strand=Plus/Plus

Query  232     GTATATATCAACaaaaaaaaaa  253
               ||||||||||| ||||||||||
Sbjct  115489  GTATATATCAAAAAAAAAAAAA  115510


 Score = 35.6 bits (38),  Expect = 4.7
 Identities = 22/24 (92%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  123     ATCTTTTTAGTCTACTTATTTCCA  146
               || |||||| ||||||||||||||
Sbjct  356041  ATTTTTTTAATCTACTTATTTCCA  356064


> Scaffold00002
Length=955678

 Score = 41.0 bits (44),  Expect = 0.11
 Identities = 30/35 (86%), Gaps = 0/35 (0%)
 Strand=Plus/Minus

Query  14      TTACATATATACACTTATGTCATATCAAATAAGTT  48
               ||||||||||| ||||||| |||||  ||||| ||
Sbjct  374857  TTACATATATATACTTATGACATATTTAATAATTT  374823


> Scaffold09579
Length=1844

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 33/40 (83%), Gaps = 3/40 (8%)
 Strand=Plus/Minus

Query  278  CCCTTTTCCCACAACACCCAATTAAATAAATAAAACTGGT  317
            || ||||||||||||||  |||||   | |||||||||||
Sbjct  283  CCTTTTTCCCACAACACGGAATTA---ATATAAAACTGGT  247


> Scaffold05374
Length=9440

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 26/29 (90%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  225   AGAAGGAGTATATATCAACaaaaaaaaaa  253
             ||| ||||||||||| | |||||||||||
Sbjct  6638  AGAGGGAGTATATATAAGCAAAAAAAAAA  6610


> Scaffold05216
Length=10244

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 26/28 (93%), Gaps = 1/28 (4%)
 Strand=Plus/Minus

Query  231   AGTATATATCAACaaaaaaaaaaGGGAG  258
             |||||||||||| |||||||| ||||||
Sbjct  1472  AGTATATATCAA-AAAAAAAAGAGGGAG  1446


> Scaffold03559
Length=23342

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 26/28 (93%), Gaps = 1/28 (4%)
 Strand=Plus/Minus

Query  231   AGTATATATCAACaaaaaaaaaaGGGAG  258
             |||||||||||| |||||||| ||||||
Sbjct  6851  AGTATATATCAA-AAAAAAAAGAGGGAG  6825


> Scaffold01515
Length=68108

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  160    TCCTTTTCCAATTATTTCTTT  180
              |||||||||||||||||||||
Sbjct  18184  TCCTTTTCCAATTATTTCTTT  18164


> Scaffold01105
Length=90364

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 39/49 (80%), Gaps = 5/49 (10%)
 Strand=Plus/Minus

Query  36     TATCAAATAAGTTTTTCTAAACACTTTGCTTAAACATAAAACAAAATTA  84
              ||||||||||||||||   |||| |||  |||||  |||||  ||||||
Sbjct  20508  TATCAAATAAGTTTTT---AACATTTT--TTAAATCTAAAAATAAATTA  20465


> Scaffold01090
Length=91409

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 29/34 (85%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  534    CTTTGTTCCATCACCAGCATGTCCCTCACTGAAT  567
              ||||||||  | ||||| |||||||||||| |||
Sbjct  24685  CTTTGTTCTTTAACCAGTATGTCCCTCACTTAAT  24718


 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 29/34 (85%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  534    CTTTGTTCCATCACCAGCATGTCCCTCACTGAAT  567
              ||||||||  | ||||| |||||||||||| |||
Sbjct  25075  CTTTGTTCTTTAACCAGTATGTCCCTCACTTAAT  25108


> Scaffold01032
Length=96464

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 27/31 (87%), Gaps = 0/31 (0%)
 Strand=Plus/Minus

Query  241    AACaaaaaaaaaaGGGAGAAGGAGTATAATG  271
              || |||| | |||||||||||||||| ||||
Sbjct  29670  AATAAAAGAGAAAGGGAGAAGGAGTACAATG  29640


> Scaffold00928
Length=104786

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 42/53 (79%), Gaps = 2/53 (4%)
 Strand=Plus/Plus

Query  221    AAGGAGAAGGAGTATATATCAACaaaaaaaaaaGGGAGAAGGAGTATAATGCA  273
              ||||| |||||||||||||   ||| | || | ||||| |||||| |||| ||
Sbjct  93355  AAGGAAAAGGAGTATATAT-TTCAACATAAGAGGGGAG-AGGAGTGTAATTCA  93405


> Scaffold00817
Length=115186

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 24/26 (92%), Gaps = 0/26 (0%)
 Strand=Plus/Minus

Query  318    GAAAGGGTATTAAGTCTCTTTATTTG  343
              |||||||| ||||| |||||||||||
Sbjct  67946  GAAAGGGTTTTAAGACTCTTTATTTG  67921


> Scaffold00798
Length=116375

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 29/34 (85%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  227    AAGGAGTATATATCAACaaaaaaaaaaGGGAGAA  260
              ||||||||||||  || ||||| |||||||| ||
Sbjct  83439  AAGGAGTATATAAAAATAAAAATAAAAGGGACAA  83472


> Scaffold00686
Length=130068

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 24/26 (92%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  380    TTTTATTTCTTGGGGGGAAGCTTGTC  405
              ||||||||||| |||| |||||||||
Sbjct  21748  TTTTATTTCTTTGGGGAAAGCTTGTC  21773


> Scaffold00629
Length=136415

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 35/43 (81%), Gaps = 2/43 (5%)
 Strand=Plus/Minus

Query  281    TTTTCCCACAACACCC--AATTAAATAAATAAAACTGGTGAAA  321
              ||||| |||||| |||  ||||||||||| |||| | || |||
Sbjct  26477  TTTTCTCACAACCCCCCAAATTAAATAAAAAAAATTAGTAAAA  26435


 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 35/43 (81%), Gaps = 2/43 (5%)
 Strand=Plus/Minus

Query  281    TTTTCCCACAACACCC--AATTAAATAAATAAAACTGGTGAAA  321
              ||||| |||||| |||  ||||||||||| |||| | || |||
Sbjct  40910  TTTTCTCACAACCCCCCAAATTAAATAAAAAAAATTAGTAAAA  40868


> Scaffold00595
Length=140595

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 27/31 (87%), Gaps = 0/31 (0%)
 Strand=Plus/Plus

Query  160    TCCTTTTCCAATTATTTCTTTACTCTCTCTC  190
              ||| ||||||||||||| ||| |||||| ||
Sbjct  52269  TCCCTTTCCAATTATTTTTTTCCTCTCTGTC  52299


> Scaffold00273
Length=220906

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 28/31 (90%), Gaps = 1/31 (3%)
 Strand=Plus/Plus

Query  8       AAATATTTA-CATATATACACTTATGTCATA  37
               ||||||||| ||||||  |||||||||||||
Sbjct  181866  AAATATTTATCATATAAGCACTTATGTCATA  181896


> Scaffold00169
Length=287895

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 24/26 (92%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  53      TAAACACTTTGCTTAAACATAAAACA  78
               ||||||||||||||||||| || |||
Sbjct  173650  TAAACACTTTGCTTAAACACAACACA  173675


 Score = 35.6 bits (38),  Expect = 4.7
 Identities = 25/29 (86%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  580     TCCTCATTTTCCAGGATTTGAAAAAATGG  608
               ||||||||||| || | ||||||| ||||
Sbjct  263087  TCCTCATTTTCAAGCAATTGAAAAGATGG  263059


> Scaffold00154
Length=301121

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  233     TATATATCAACaaaaaaaaaa  253
               |||||||||||||||||||||
Sbjct  120549  TATATATCAACAAAAAAAAAA  120569


> Scaffold00102
Length=355175

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 48/62 (77%), Gaps = 4/62 (6%)
 Strand=Plus/Minus

Query  26      ACTTATGTC--ATATCAAATAAGTTTTTCTAAACACTTTGCTT-AAACATAAAACAAAAT  82
               ||||||| |  |||| ||||||||||| ||| | | ||| ||| ||  |||||| ||| |
Sbjct  179827  ACTTATGACTTATATAAAATAAGTTTTACTATA-ATTTTTCTTCAATTATAAAAAAAATT  179769

Query  83      TA  84
               ||
Sbjct  179768  TA  179767


> Scaffold00069
Length=423095

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 26/29 (90%), Gaps = 0/29 (0%)
 Strand=Plus/Plus

Query  499     ACAAGTTTTAGTTTACTTCACTTTTTTCA  527
               |||||||||  ||| ||||||||||||||
Sbjct  198218  ACAAGTTTTCATTTTCTTCACTTTTTTCA  198246


> Scaffold00012
Length=678911

 Score = 39.2 bits (42),  Expect = 0.39
 Identities = 26/28 (93%), Gaps = 1/28 (4%)
 Strand=Plus/Minus

Query  250     aaaaGGGAGAAGGAGTATAATGCATTTT  277
               ||||||||||||||||| |||| |||||
Sbjct  280838  AAAAGGGAGAAGGAGTA-AATGAATTTT  280812


> Scaffold09557
Length=1850

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 32/39 (82%), Gaps = 2/39 (5%)
 Strand=Plus/Minus

Query  17    CATATATACACTTATGTCA--TATCAAATAAGTTTTTCT  53
             ||||||||||| |||| ||  || |||| ||||||| ||
Sbjct  1260  CATATATACACATATGGCACTTACCAAACAAGTTTTGCT  1222


> Scaffold06592
Length=5551

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 26/30 (87%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  1     TTTTTCCAAATATTTACATATATACACTTA  30
             ||||||||||||||| |||| | | |||||
Sbjct  1288  TTTTTCCAAATATTTCCATAAACATACTTA  1317


> Scaffold03767
Length=20922

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 47/61 (77%), Gaps = 4/61 (7%)
 Strand=Plus/Minus

Query  27     CTTATGTC--ATATCAAATAAGTTTTTCTAAACACTTTGCTT-AAACATAAAACAAAATT  83
              ||||||||  |||| ||||||||||| ||| | | ||| ||| ||  ||||||  || ||
Sbjct  11453  CTTATGTCTTATATAAAATAAGTTTTACTATA-ATTTTTCTTCAATTATAAAAGTAACTT  11395

Query  84     A  84
              |
Sbjct  11394  A  11394


> Scaffold02673
Length=36471

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 32/39 (82%), Gaps = 3/39 (8%)
 Strand=Plus/Minus

Query  427    TTGATTTGCTGGCACTT---TCTGCTTCACAGGTTTCCG  462
              || |||||||| || ||   ||||||||||||||| |||
Sbjct  23931  TTCATTTGCTGCCAGTTCCATCTGCTTCACAGGTTGCCG  23893


> Scaffold01916
Length=53828

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 25/28 (89%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  26     ACTTATGTCATATCAAATAAGTTTTTCT  53
              ||| || |||||||||||| ||||||||
Sbjct  47773  ACTCATTTCATATCAAATATGTTTTTCT  47800


> Scaffold01681
Length=61887

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 31/37 (84%), Gaps = 1/37 (3%)
 Strand=Plus/Plus

Query  61     TTGCTTAAACATAAAACAAAATTAAGGGTGaaaaaaa  97
              |||||||||||  | | |||| ||| |||||||||||
Sbjct  37004  TTGCTTAAACAGCAGA-AAAAATAAAGGTGAAAAAAA  37039


> Scaffold01493
Length=69233

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 40/52 (77%), Gaps = 6/52 (12%)
 Strand=Plus/Plus

Query  13     TTTACATATATACACTTATGTCATA-----TCAAATAAGTT-TTTCTAAACA  58
              || |||||||  |||||||||||||     | ||||||||| | || |||||
Sbjct  21794  TTAACATATAAGCACTTATGTCATAAGTGCTTAAATAAGTTGTGTCCAAACA  21845


> Scaffold00679
Length=130594

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 34/42 (81%), Gaps = 2/42 (5%)
 Strand=Plus/Plus

Query  42     ATAAGTTTTTCTAAACACTTTGCTTAA--ACATAAAACAAAA  81
              ||||||||||||||||||| | | |||  || || | |||||
Sbjct  91377  ATAAGTTTTTCTAAACACTATACATAAGCACTTATACCAAAA  91418


> Scaffold00617
Length=138153

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 26/30 (87%), Gaps = 0/30 (0%)
 Strand=Plus/Minus

Query  66      TAAACATAAAACAAAATTAAGGGTGaaaaa  95
               |||| || ||  ||||||||||||||||||
Sbjct  122783  TAAAAATGAATTAAAATTAAGGGTGAAAAA  122754


> Scaffold00615
Length=138329

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 39/51 (76%), Gaps = 9/51 (18%)
 Strand=Plus/Minus

Query  18     ATATATACACTTATGTCATA--------TCAAATAAG-TTTTTCTAAACAC  59
              ||||| || |||||||||||        | ||||||| |||||||||||||
Sbjct  57327  ATATAAACGCTTATGTCATAAGATTAGCTTAAATAAGTTTTTTCTAAACAC  57277


> Scaffold00609
Length=139443

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 32/40 (80%), Gaps = 0/40 (0%)
 Strand=Plus/Plus

Query  59     CTTTGCTTAAACATAAAACAAAATTAAGGGTGaaaaaaaT  98
              ||||  | ||| | ||||||||||||||  | ||||||||
Sbjct  10089  CTTTTTTGAAAAACAAAACAAAATTAAGCATTAAAAAAAT  10128


> Scaffold00541
Length=149146

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 36/44 (82%), Gaps = 2/44 (5%)
 Strand=Plus/Minus

Query  4      TTCCAAATATTTACATATATACAC-TTATGTCATATCA-AATAA  45
              ||| |||||| || |||||||||| |||||| | || | |||||
Sbjct  53414  TTCAAAATATATATATATATACACTTTATGTTAAATAATAATAA  53371


> Scaffold00462
Length=162168

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 22/23 (96%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  504     TTTTAGTTTACTTCACTTTTTTC  526
               ||||||| |||||||||||||||
Sbjct  130356  TTTTAGTATACTTCACTTTTTTC  130378


> Scaffold00404
Length=173969

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 22/23 (96%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  40      AAATAAGTTTTTCTAAACACTTT  62
               |||||||||||||||||||| ||
Sbjct  162284  AAATAAGTTTTTCTAAACACATT  162306


> Scaffold00318
Length=199853

 Score = 37.4 bits (40),  Expect = 1.4
 Identities = 32/37 (86%), Gaps = 2/37 (5%)
 Strand=Plus/Minus

Query  103    TTTCTTTTACATGCCATGACATCTTTTTAGTCTACTT  139
              |||||||||||| |||||| ||| ||||| ||| |||
Sbjct  69332  TTTCTTTTACATTCCATGA-ATC-TTTTATTCTTCTT  69298



Lambda      K        H
   0.634    0.408    0.914 

Gapped
Lambda      K        H
   0.625    0.410    0.780 

Effective search space used: 238443018030


  Database: Glycyrrhiza_uralensis.fa
    Posted date:  Jan 8, 2019  2:46 PM
  Number of letters in database: 378,856,821
  Number of sequences in database:  12,528



Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2