BLAST Results


TBLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycyrrhiza_uralensis.cds 38,135 sequences; 41,815,236 total letters Query= Glyur009531s00047941.1 protein AED:0.00 eAED:0.00 QI:0|-1|0|1|-1|1|1|0|128 Length=128 Score E Sequences producing significant alignments: (Bits) Value Glyur009531s00047941.1 gene=Glyur009531s00047941 261 2e-90 Glyur000077s00006690.1 gene=Glyur000077s00006690 247 1e-79 Glyur000692s00016543.2 gene=Glyur000692s00016543 142 2e-40 Glyur000692s00016543.1 gene=Glyur000692s00016543 142 2e-40 Glyur000089s00008776.1 gene=Glyur000089s00008776 112 1e-29 Glyur000698s00016574.1 gene=Glyur000698s00016574 43.5 1e-05 Glyur000270s00013282.1 gene=Glyur000270s00013282 38.5 5e-04 Glyur000200s00011165.1 gene=Glyur000200s00011165 38.5 5e-04 Glyur000270s00013282.2 gene=Glyur000270s00013282 38.5 5e-04 Glyur001653s00028826.1 gene=Glyur001653s00028826 30.0 0.48 Glyur001376s00030057.1 gene=Glyur001376s00030057 26.9 5.3 > Glyur009531s00047941.1 on Glyur009531s00047941.1 gene=Glyur009531s00047941 Length=387 Score = 261 bits (668), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%) Frame = +1 Query 1 YFLSLLSQEKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALV 60 YFLSLLSQEKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALV Sbjct 1 YFLSLLSQEKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALV 180 Query 61 TIGSDVSPMLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARK 120 TIGSDVSPMLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARK Sbjct 181 TIGSDVSPMLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARK 360 Query 121 PPPHFSFT 128 PPPHFSFT Sbjct 361 PPPHFSFT 384 > Glyur009531s00047941.1 on Glyur000077s00006690.1 gene=Glyur000077s00006690 Length=1575 Score = 247 bits (630), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 119/120 (99%), Positives = 119/120 (99%), Gaps = 0/120 (0%) Frame = +1 Query 9 EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSP 68 EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENE DALVTIGSDVSP Sbjct 1213 EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENEXDALVTIGSDVSP 1392 Query 69 MLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPPHFSFT 128 MLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPPHFSFT Sbjct 1393 MLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPPHFSFT 1572 > Glyur009531s00047941.1 on Glyur000692s00016543.2 gene=Glyur000692s00016543 Length=1455 Score = 142 bits (358), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (77%), Gaps = 1/111 (1%) Frame = +1 Query 13 EYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSPMLAI 72 EYGQ+ + ++K+ G G+ + +A+ M LSQ GFEKLMK N+LDA+V S +LAI Sbjct 1060 EYGQDLMVQAQKTNGIGKAQKQALLNMTXLSQEGFEKLMKRNKLDAVVIPFSSFXSILAI 1239 Query 73 GGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP 123 GGYP + VPAGY+ +G+PFGICFGGLKG+EPKLIEIAY FEQAT RKPPP Sbjct 1240 GGYPGVIVPAGYE-EGVPFGICFGGLKGSEPKLIEIAYSFEQATMIRKPPP 1389 > Glyur009531s00047941.1 on Glyur000692s00016543.1 gene=Glyur000692s00016543 Length=1467 Score = 142 bits (358), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (77%), Gaps = 1/111 (1%) Frame = +1 Query 13 EYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSPMLAI 72 EYGQ+ + ++K+ G G+ + +A+ M LSQ GFEKLMK N+LDA+V S +LAI Sbjct 1072 EYGQDLMVQAQKTNGIGKAQKQALLNMTXLSQEGFEKLMKRNKLDAVVIPFSSFXSILAI 1251 Query 73 GGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP 123 GGYP + VPAGY+ +G+PFGICFGGLKG+EPKLIEIAY FEQAT RKPPP Sbjct 1252 GGYPGVIVPAGYE-EGVPFGICFGGLKGSEPKLIEIAYSFEQATMIRKPPP 1401 > Glyur009531s00047941.1 on Glyur000089s00008776.1 gene=Glyur000089s00008776 Length=1455 Score = 112 bits (279), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 50/91 (55%), Positives = 73/91 (80%), Gaps = 0/91 (0%) Frame = +1 Query 9 EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSP 68 E NE+GQ+F +A++++ G+G++E EA++ + +LS+NG EKLMK+ +LDALVT GS + Sbjct 1168 EMLNEFGQDFMLAAQETNGYGDKEKEALDNLARLSRNGLEKLMKDYKLDALVTPGSKIYH 1347 Query 69 MLAIGGYPAITVPAGYDSQGMPFGICFGGLK 99 +L IGG+P I VPAGYD +G+PFGI FGGL+ Sbjct 1348 VLDIGGFPGINVPAGYDFEGIPFGITFGGLR 1440 > Glyur009531s00047941.1 on Glyur000698s00016574.1 gene=Glyur000698s00016574 Length=1620 Score = 43.5 bits (101), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/56 (38%), Positives = 31/56 (55%), Gaps = 2/56 (4%) Frame = +1 Query 74 GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRA--RKPPPHFSF 127 G PA+TVP GYD G+P G+ F G +E LI +A+ + + RKP ++ Sbjct 1441 GLPAVTVPVGYDKLGLPIGLQFIGRPWSEATLIHLAFAMQTICMSDYRKPELYYDL 1608 > Glyur009531s00047941.1 on Glyur000270s00013282.1 gene=Glyur000270s00013282 Length=1854 Score = 38.5 bits (88), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 0/50 (0%) Frame = +1 Query 74 GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP 123 G PAI+VP GYD +G+P G+ G E ++ +A E+ K P Sbjct 1666 GLPAISVPVGYDKEGLPIGLQIIGRPWAEATILRVASAVEKLCGGSKKRP 1815 > Glyur009531s00047941.1 on Glyur000200s00011165.1 gene=Glyur000200s00011165 Length=1680 Score = 38.5 bits (88), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +1 Query 74 GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRA--RKP 121 G PA+T+ GYD G+P G+ F G E LI +A+ + + RKP Sbjct 1498 GLPAVTIAVGYDKLGLPIGLQFIGRPWAEATLIHLAFAMQAICLSEYRKP 1647 > Glyur009531s00047941.1 on Glyur000270s00013282.2 gene=Glyur000270s00013282 Length=1830 Score = 38.5 bits (88), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 0/50 (0%) Frame = +1 Query 74 GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP 123 G PAI+VP GYD +G+P G+ G E ++ +A E+ K P Sbjct 1642 GLPAISVPVGYDKEGLPIGLQIIGRPWAEATILRVASAVEKLCGGSKKRP 1791 > Glyur009531s00047941.1 on Glyur001653s00028826.1 gene=Glyur001653s00028826 Length=1005 Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust. Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 4/29 (14%) Frame = +1 Query 69 MLAIGGYPAITVPAGYDSQGMPFGICFGG 97 +L + G PAI+ YD QG+ F I FGG Sbjct 472 LLRVQGRPAIS----YDDQGLVFAIAFGG 546 > Glyur009531s00047941.1 on Glyur001376s00030057.1 gene=Glyur001376s00030057 Length=1140 Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (9%) Frame = +1 Query 49 KLMKEN-ELDALVTIGSDVSPMLAIGGYPAITVPAGYDSQGMPFG 92 KL+K N +++ L+ M G P + +PA D +G PFG Sbjct 286 KLLKPNLKVEGLIIASCSTGNM---GNLPVVIIPAICDQKGGPFG 411 Lambda K H a alpha 0.317 0.137 0.393 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 423301280 Database: Glycyrrhiza_uralensis.cds Posted date: Jan 8, 2019 2:46 PM Number of letters in database: 41,815,236 Number of sequences in database: 38,135 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40