BLAST Search Results

BLAST Results




TBLASTN 2.2.28+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: Glycyrrhiza_uralensis.cds
           38,135 sequences; 41,815,236 total letters



Query= Glyur009531s00047941.1  protein AED:0.00 eAED:0.00
QI:0|-1|0|1|-1|1|1|0|128

Length=128
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Glyur009531s00047941.1 gene=Glyur009531s00047941                     261    2e-90
  Glyur000077s00006690.1 gene=Glyur000077s00006690                     247    1e-79
  Glyur000692s00016543.2 gene=Glyur000692s00016543                     142    2e-40
  Glyur000692s00016543.1 gene=Glyur000692s00016543                     142    2e-40
  Glyur000089s00008776.1 gene=Glyur000089s00008776                     112    1e-29
  Glyur000698s00016574.1 gene=Glyur000698s00016574                    43.5    1e-05
  Glyur000270s00013282.1 gene=Glyur000270s00013282                    38.5    5e-04
  Glyur000200s00011165.1 gene=Glyur000200s00011165                    38.5    5e-04
  Glyur000270s00013282.2 gene=Glyur000270s00013282                    38.5    5e-04
  Glyur001653s00028826.1 gene=Glyur001653s00028826                    30.0    0.48 
  Glyur001376s00030057.1 gene=Glyur001376s00030057                    26.9    5.3  


> Glyur009531s00047941.1 on Glyur009531s00047941.1 gene=Glyur009531s00047941
Length=387

 Score =  261 bits (668),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
 Frame = +1

Query  1    YFLSLLSQEKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALV  60
            YFLSLLSQEKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALV
Sbjct  1    YFLSLLSQEKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALV  180

Query  61   TIGSDVSPMLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARK  120
            TIGSDVSPMLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARK
Sbjct  181  TIGSDVSPMLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARK  360

Query  121  PPPHFSFT  128
            PPPHFSFT
Sbjct  361  PPPHFSFT  384


> Glyur009531s00047941.1 on Glyur000077s00006690.1 gene=Glyur000077s00006690
Length=1575

 Score =  247 bits (630),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 119/120 (99%), Positives = 119/120 (99%), Gaps = 0/120 (0%)
 Frame = +1

Query  9     EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSP  68
             EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENE DALVTIGSDVSP
Sbjct  1213  EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENEXDALVTIGSDVSP  1392

Query  69    MLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPPHFSFT  128
             MLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPPHFSFT
Sbjct  1393  MLAIGGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPPHFSFT  1572


> Glyur009531s00047941.1 on Glyur000692s00016543.2 gene=Glyur000692s00016543
Length=1455

 Score =  142 bits (358),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (77%), Gaps = 1/111 (1%)
 Frame = +1

Query  13    EYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSPMLAI  72
             EYGQ+  + ++K+ G G+ + +A+  M  LSQ GFEKLMK N+LDA+V   S    +LAI
Sbjct  1060  EYGQDLMVQAQKTNGIGKAQKQALLNMTXLSQEGFEKLMKRNKLDAVVIPFSSFXSILAI  1239

Query  73    GGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP  123
             GGYP + VPAGY+ +G+PFGICFGGLKG+EPKLIEIAY FEQAT  RKPPP
Sbjct  1240  GGYPGVIVPAGYE-EGVPFGICFGGLKGSEPKLIEIAYSFEQATMIRKPPP  1389


> Glyur009531s00047941.1 on Glyur000692s00016543.1 gene=Glyur000692s00016543
Length=1467

 Score =  142 bits (358),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (77%), Gaps = 1/111 (1%)
 Frame = +1

Query  13    EYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSPMLAI  72
             EYGQ+  + ++K+ G G+ + +A+  M  LSQ GFEKLMK N+LDA+V   S    +LAI
Sbjct  1072  EYGQDLMVQAQKTNGIGKAQKQALLNMTXLSQEGFEKLMKRNKLDAVVIPFSSFXSILAI  1251

Query  73    GGYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP  123
             GGYP + VPAGY+ +G+PFGICFGGLKG+EPKLIEIAY FEQAT  RKPPP
Sbjct  1252  GGYPGVIVPAGYE-EGVPFGICFGGLKGSEPKLIEIAYSFEQATMIRKPPP  1401


> Glyur009531s00047941.1 on Glyur000089s00008776.1 gene=Glyur000089s00008776
Length=1455

 Score =  112 bits (279),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 50/91 (55%), Positives = 73/91 (80%), Gaps = 0/91 (0%)
 Frame = +1

Query  9     EKTNEYGQEFFIASEKSRGFGEREIEAVEMMEQLSQNGFEKLMKENELDALVTIGSDVSP  68
             E  NE+GQ+F +A++++ G+G++E EA++ + +LS+NG EKLMK+ +LDALVT GS +  
Sbjct  1168  EMLNEFGQDFMLAAQETNGYGDKEKEALDNLARLSRNGLEKLMKDYKLDALVTPGSKIYH  1347

Query  69    MLAIGGYPAITVPAGYDSQGMPFGICFGGLK  99
             +L IGG+P I VPAGYD +G+PFGI FGGL+
Sbjct  1348  VLDIGGFPGINVPAGYDFEGIPFGITFGGLR  1440


> Glyur009531s00047941.1 on Glyur000698s00016574.1 gene=Glyur000698s00016574
Length=1620

 Score = 43.5 bits (101),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 21/56 (38%), Positives = 31/56 (55%), Gaps = 2/56 (4%)
 Frame = +1

Query  74    GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRA--RKPPPHFSF  127
             G PA+TVP GYD  G+P G+ F G   +E  LI +A+  +    +  RKP  ++  
Sbjct  1441  GLPAVTVPVGYDKLGLPIGLQFIGRPWSEATLIHLAFAMQTICMSDYRKPELYYDL  1608


> Glyur009531s00047941.1 on Glyur000270s00013282.1 gene=Glyur000270s00013282
Length=1854

 Score = 38.5 bits (88),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 0/50 (0%)
 Frame = +1

Query  74    GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP  123
             G PAI+VP GYD +G+P G+   G    E  ++ +A   E+     K  P
Sbjct  1666  GLPAISVPVGYDKEGLPIGLQIIGRPWAEATILRVASAVEKLCGGSKKRP  1815


> Glyur009531s00047941.1 on Glyur000200s00011165.1 gene=Glyur000200s00011165
Length=1680

 Score = 38.5 bits (88),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query  74    GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRA--RKP  121
             G PA+T+  GYD  G+P G+ F G    E  LI +A+  +    +  RKP
Sbjct  1498  GLPAVTIAVGYDKLGLPIGLQFIGRPWAEATLIHLAFAMQAICLSEYRKP  1647


> Glyur009531s00047941.1 on Glyur000270s00013282.2 gene=Glyur000270s00013282
Length=1830

 Score = 38.5 bits (88),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 0/50 (0%)
 Frame = +1

Query  74    GYPAITVPAGYDSQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPP  123
             G PAI+VP GYD +G+P G+   G    E  ++ +A   E+     K  P
Sbjct  1642  GLPAISVPVGYDKEGLPIGLQIIGRPWAEATILRVASAVEKLCGGSKKRP  1791


> Glyur009531s00047941.1 on Glyur001653s00028826.1 gene=Glyur001653s00028826
Length=1005

 Score = 30.0 bits (66),  Expect = 0.48, Method: Compositional matrix adjust.
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 4/29 (14%)
 Frame = +1

Query  69   MLAIGGYPAITVPAGYDSQGMPFGICFGG  97
            +L + G PAI+    YD QG+ F I FGG
Sbjct  472  LLRVQGRPAIS----YDDQGLVFAIAFGG  546


> Glyur009531s00047941.1 on Glyur001376s00030057.1 gene=Glyur001376s00030057
Length=1140

 Score = 26.9 bits (58),  Expect = 5.3, Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (9%)
 Frame = +1

Query  49   KLMKEN-ELDALVTIGSDVSPMLAIGGYPAITVPAGYDSQGMPFG  92
            KL+K N +++ L+        M   G  P + +PA  D +G PFG
Sbjct  286  KLLKPNLKVEGLIIASCSTGNM---GNLPVVIIPAICDQKGGPFG  411



Lambda      K        H        a         alpha
   0.317    0.137    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 423301280


  Database: Glycyrrhiza_uralensis.cds
    Posted date:  Jan 8, 2019  2:46 PM
  Number of letters in database: 41,815,236
  Number of sequences in database:  38,135



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40