BLASTN 2.2.28+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: Moringa_oleifera.cds
           19,465 sequences; 24,268,338 total letters



Query= lamu_GLEAN_10000215_LAMU

Length=384
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  lamu_GLEAN_10000215_LAMU                                             693    0.0  
  lamu_GLEAN_10013645_LAMU                                             214    3e-55
  lamu_GLEAN_10009036_LAMU                                            37.4    0.048
  lamu_GLEAN_10007086_LAMU                                            35.6    0.17 
  lamu_GLEAN_10007071_LAMU                                            35.6    0.17 
  lamu_GLEAN_10008884_LAMU                                            35.6    0.17 
  lamu_GLEAN_10015862_LAMU                                            35.6    0.17 
  lamu_GLEAN_10016238_LAMU                                            33.7    0.59 
  lamu_GLEAN_10013790_LAMU                                            33.7    0.59 
  lamu_GLEAN_10016499_LAMU                                            31.9    2.1  
  lamu_GLEAN_10005900_LAMU                                            31.9    2.1  
  lamu_GLEAN_10012273_LAMU                                            31.9    2.1  
  lamu_GLEAN_10010766_LAMU                                            31.9    2.1  
  lamu_GLEAN_10010019_LAMU                                            31.9    2.1  
  lamu_GLEAN_10005205_LAMU                                            31.9    2.1  
  lamu_GLEAN_10007682_LAMU                                            31.9    2.1  
  lamu_GLEAN_10013137_LAMU                                            31.9    2.1  
  lamu_GLEAN_10013062_LAMU                                            31.9    2.1  
  lamu_GLEAN_10011391_LAMU                                            30.1    7.2  
  lamu_GLEAN_10019302_LAMU                                            30.1    7.2  
  lamu_GLEAN_10019028_LAMU                                            30.1    7.2  
  lamu_GLEAN_10018659_LAMU                                            30.1    7.2  
  lamu_GLEAN_10018562_LAMU                                            30.1    7.2  
  lamu_GLEAN_10017434_LAMU                                            30.1    7.2  
  lamu_GLEAN_10007073_LAMU                                            30.1    7.2  
  lamu_GLEAN_10006179_LAMU                                            30.1    7.2  
  lamu_GLEAN_10003448_LAMU                                            30.1    7.2  
  lamu_GLEAN_10013628_LAMU                                            30.1    7.2  
  lamu_GLEAN_10003330_LAMU                                            30.1    7.2  


> lamu_GLEAN_10000215_LAMU
Length=384

 Score =  693 bits (768),  Expect = 0.0
 Identities = 384/384 (100%), Gaps = 0/384 (0%)
 Strand=Plus/Plus

Query  1    ATGTCCTTTCTCTGGCTAGAATTCTCTCAGTCTTTCCAAGTCTTGGCCATCCTGTTGACC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGTCCTTTCTCTGGCTAGAATTCTCTCAGTCTTTCCAAGTCTTGGCCATCCTGTTGACC  60

Query  61   ACTCTGTTATACTGCGTCGTTTACGGCTACCGTTTCTGGACCGCGATCGGGCTGCCGGGA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   ACTCTGTTATACTGCGTCGTTTACGGCTACCGTTTCTGGACCGCGATCGGGCTGCCGGGA  120

Query  121  GCCTGCTTCCCGCTGGTGGTGAATTGCCAGGTGGCGCTGCTGGGCTGTAACCTGGTCTGC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  GCCTGCTTCCCGCTGGTGGTGAATTGCCAGGTGGCGCTGCTGGGCTGTAACCTGGTCTGC  180

Query  181  CATTTCGGGGTGCTTTTGCTTCACTTCTTGAAGGGAGGGTGTAACGGGATCGGCGCTTGG  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  CATTTCGGGGTGCTTTTGCTTCACTTCTTGAAGGGAGGGTGTAACGGGATCGGCGCTTGG  240

Query  241  GGCTTTAATTCTGTACTCAACGGTGCAATCTTGCTGCTGTTCTTGAAGTTCTACGTGAAG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  GGCTTTAATTCTGTACTCAACGGTGCAATCTTGCTGCTGTTCTTGAAGTTCTACGTGAAG  300

Query  301  ATGCATTTGAGGAAGAGAAAGCTCGGTGGCAAAGCCATCGGCGACGATCTTCAGTCGGTA  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  ATGCATTTGAGGAAGAGAAAGCTCGGTGGCAAAGCCATCGGCGACGATCTTCAGTCGGTA  360

Query  361  GACGGCAAACAGAAGGATAGCTGA  384
            ||||||||||||||||||||||||
Sbjct  361  GACGGCAAACAGAAGGATAGCTGA  384


> lamu_GLEAN_10013645_LAMU
Length=627

 Score =  214 bits (236),  Expect = 3e-55
 Identities = 211/273 (77%), Gaps = 0/273 (0%)
 Strand=Plus/Plus

Query  44   TGGCCATCCTGTTGACCACTCTGTTATACTGCGTCGTTTACGGCTACCGTTTCTGGACCG  103
            |||||||||| || || || ||| | |||| |||||| ||||| |||||||||||||| |
Sbjct  336  TGGCCATCCTCTTCACTACCCTGGTTTACTCCGTCGTATACGGGTACCGTTTCTGGACAG  395

Query  104  CGATCGGGCTGCCGGGAGCCTGCTTCCCGCTGGTGGTGAATTGCCAGGTGGCGCTGCTGG  163
              |||||| | |   | || ||||||||  | ||||||||||||||| | | | || |||
Sbjct  396  GAATCGGGTTACGCAGCGCGTGCTTCCCTTTCGTGGTGAATTGCCAGATTGTGTTGTTGG  455

Query  164  GCTGTAACCTGGTCTGCCATTTCGGGGTGCTTTTGCTTCACTTCTTGAAGGGAGGGTGTA  223
            | || ||  ||||  ||||| | || |||||| |||| || ||| |||| || || || |
Sbjct  456  GTTGCAATGTGGTGAGCCATGTGGGCGTGCTTCTGCTGCATTTCCTGAAAGGCGGATGCA  515

Query  224  ACGGGATCGGCGCTTGGGGCTTTAATTCTGTACTCAACGGTGCAATCTTGCTGCTGTTCT  283
            | |||||||| || |||| ||| ||||| ||  | ||||| || || ||| |||||||||
Sbjct  516  ATGGGATCGGTGCCTGGGTCTTCAATTCGGTGTTGAACGGCGCCATTTTGTTGCTGTTCT  575

Query  284  TGAAGTTCTACGTGAAGATGCATTTGAGGAAGA  316
            |||| || ||||| || |||||||||| |||||
Sbjct  576  TGAACTTTTACGTAAAAATGCATTTGAAGAAGA  608


> lamu_GLEAN_10009036_LAMU
Length=717

 Score = 37.4 bits (40),  Expect = 0.048
 Identities = 28/32 (88%), Gaps = 1/32 (3%)
 Strand=Plus/Minus

Query  2    TGTCCTTTCTCTGGCTAGAATTCTCTCAGTCT  33
            ||||||| ||||  ||||||||||||| ||||
Sbjct  135  TGTCCTT-CTCTCTCTAGAATTCTCTCTGTCT  105


> lamu_GLEAN_10007086_LAMU
Length=1971

 Score = 35.6 bits (38),  Expect = 0.17
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  191   TGCTTTTGCTTCACTTCTT  209
             |||||||||||||||||||
Sbjct  1422  TGCTTTTGCTTCACTTCTT  1404


> lamu_GLEAN_10007071_LAMU
Length=1626

 Score = 35.6 bits (38),  Expect = 0.17
 Identities = 25/29 (86%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  60   CACTCTGTTATACTGCGTCGTTTACGGCT  88
            ||||||   | ||||||||||||||||||
Sbjct  106  CACTCTTCGAAACTGCGTCGTTTACGGCT  78


> lamu_GLEAN_10008884_LAMU
Length=3579

 Score = 35.6 bits (38),  Expect = 0.17
 Identities = 24/27 (89%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  270   CTTGCTGCTGTTCTTGAAGTTCTACGT  296
             ||||||||||||| |||| ||||| ||
Sbjct  3286  CTTGCTGCTGTTCATGAATTTCTAGGT  3312


> lamu_GLEAN_10015862_LAMU
Length=549

 Score = 35.6 bits (38),  Expect = 0.17
 Identities = 27/31 (87%), Gaps = 1/31 (3%)
 Strand=Plus/Plus

Query  297  GAAGATGCAT-TTGAGGAAGAGAAAGCTCGG  326
            ||||  |||| ||||||||||||||||| ||
Sbjct  464  GAAGGAGCATGTTGAGGAAGAGAAAGCTTGG  494


> lamu_GLEAN_10016238_LAMU
Length=2067

 Score = 33.7 bits (36),  Expect = 0.59
 Identities = 24/28 (86%), Gaps = 0/28 (0%)
 Strand=Plus/Minus

Query  9     TCTCTGGCTAGAATTCTCTCAGTCTTTC  36
             |||||| | |||||||||||| || |||
Sbjct  1189  TCTCTGCCAAGAATTCTCTCATTCCTTC  1162


> lamu_GLEAN_10013790_LAMU
Length=2745

 Score = 33.7 bits (36),  Expect = 0.59
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Minus

Query  268  ATCTTGCTGCTGTTCTTG  285
            ||||||||||||||||||
Sbjct  774  ATCTTGCTGCTGTTCTTG  757


> lamu_GLEAN_10016499_LAMU
Length=2142

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 21/22 (95%), Gaps = 1/22 (5%)
 Strand=Plus/Minus

Query  189  GGTGCTTTTGCTTC-ACTTCTT  209
            |||||||||||||| |||||||
Sbjct  919  GGTGCTTTTGCTTCAACTTCTT  898


> lamu_GLEAN_10005900_LAMU
Length=1086

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 25/29 (86%), Gaps = 2/29 (7%)
 Strand=Plus/Plus

Query  297  GAAGATGCATTTGAGGAA--GAGAAAGCT  323
            |||||||||||||| |||  | |||||||
Sbjct  262  GAAGATGCATTTGAAGAAGGGGGAAAGCT  290


> lamu_GLEAN_10012273_LAMU
Length=1842

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Minus

Query  20   AATTCTCTCAGTCTTTCCAAGT  41
            ||| ||||| ||||||||||||
Sbjct  863  AATCCTCTCGGTCTTTCCAAGT  842


> lamu_GLEAN_10010766_LAMU
Length=609

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  269  TCTTGCTGCTGTTCTTG  285
            |||||||||||||||||
Sbjct  132  TCTTGCTGCTGTTCTTG  148


> lamu_GLEAN_10010019_LAMU
Length=2412

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  301  ATGCATTTGAGGAAGAGAAA  320
            ||||||||||| ||||||||
Sbjct  425  ATGCATTTGAGCAAGAGAAA  444


> lamu_GLEAN_10005205_LAMU
Length=756

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Minus

Query  121  GCCTGCTTCCCGCTGGTGGTGA  142
            ||||||||||||||| || |||
Sbjct  603  GCCTGCTTCCCGCTGTTGTTGA  582


> lamu_GLEAN_10007682_LAMU
Length=2163

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 22/24 (92%), Gaps = 2/24 (8%)
 Strand=Plus/Plus

Query  190   GTGCTTTTGCTTCACTTCTTGAAG  213
             |||||||  |||||||||||||||
Sbjct  1525  GTGCTTT--CTTCACTTCTTGAAG  1546


> lamu_GLEAN_10013137_LAMU
Length=1689

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  297  GAAGATGCATTTGAGGA  313
            |||||||||||||||||
Sbjct  759  GAAGATGCATTTGAGGA  743


> lamu_GLEAN_10013062_LAMU
Length=1512

 Score = 31.9 bits (34),  Expect = 2.1
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  15   GCTAGAATTCTCTCAGT  31
            |||||||||||||||||
Sbjct  788  GCTAGAATTCTCTCAGT  772


> lamu_GLEAN_10011391_LAMU
Length=2781

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 22/25 (88%), Gaps = 2/25 (8%)
 Strand=Plus/Plus

Query  276   GCTGTTCTTGAAGTTCTACGTGAAG  300
             ||||||||||||||  ||| |||||
Sbjct  2082  GCTGTTCTTGAAGT--TACTTGAAG  2104


> lamu_GLEAN_10019302_LAMU
Length=573

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Minus

Query  269  TCTTGCTGCTGTTCTT  284
            ||||||||||||||||
Sbjct  156  TCTTGCTGCTGTTCTT  141


> lamu_GLEAN_10019028_LAMU
Length=6378

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  363   CGGCAAACAGAAGGATAGC  381
             |||||||||||| ||||||
Sbjct  1136  CGGCAAACAGAAAGATAGC  1154


> lamu_GLEAN_10018659_LAMU
Length=1050

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 19/21 (90%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  55   TTGACCACTCTGTTATACTGC  75
            ||||||||||||| || ||||
Sbjct  769  TTGACCACTCTGTGATTCTGC  749


> lamu_GLEAN_10018562_LAMU
Length=1341

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  268  ATCTTGCTGCTGTTCTTGA  286
            ||||| |||||||||||||
Sbjct  24   ATCTTCCTGCTGTTCTTGA  6


> lamu_GLEAN_10017434_LAMU
Length=639

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Plus

Query  296  TGAAGATGCATTTGAG  311
            ||||||||||||||||
Sbjct  495  TGAAGATGCATTTGAG  510


> lamu_GLEAN_10007073_LAMU
Length=591

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  263  GTGCAATCTTGCTGCTGTT  281
            |||||||||||| ||||||
Sbjct  474  GTGCAATCTTGCAGCTGTT  492


> lamu_GLEAN_10006179_LAMU
Length=1383

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 21/23 (91%), Gaps = 1/23 (4%)
 Strand=Plus/Plus

Query  190  GTGCTTTT-GCTTCACTTCTTGA  211
            || ||||| ||||||||||||||
Sbjct  133  GTACTTTTCGCTTCACTTCTTGA  155


> lamu_GLEAN_10003448_LAMU
Length=1485

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 29/36 (81%), Gaps = 1/36 (3%)
 Strand=Plus/Plus

Query  284  TGAAGTTCTACGTGAAG-ATGCATTTGAGGAAGAGA  318
            || |||||||||||||| | ||   | |||||||||
Sbjct  857  TGGAGTTCTACGTGAAGAAGGCTGCTCAGGAAGAGA  892


> lamu_GLEAN_10013628_LAMU
Length=1620

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 19/21 (90%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  321   GCTCGGTGGCAAAGCCATCGG  341
             |||| ||||||||||| ||||
Sbjct  1587  GCTCTGTGGCAAAGCCGTCGG  1607


> lamu_GLEAN_10003330_LAMU
Length=684

 Score = 30.1 bits (32),  Expect = 7.2
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Plus

Query  310  AGGAAGAGAAAGCTCG  325
            ||||||||||||||||
Sbjct  656  AGGAAGAGAAAGCTCG  671



Lambda      K        H
   0.634    0.408    0.912 

Gapped
Lambda      K        H
   0.625    0.410    0.780 

Effective search space used: 8506884784


  Database: Moringa_oleifera.cds
    Posted date:  Jan 8, 2019  12:51 PM
  Number of letters in database: 24,268,338
  Number of sequences in database:  19,465



Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2