BLASTN 2.2.28+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: Calotropis_gigantea.cds
           20,832 sequences; 28,036,827 total letters



Query= cal_g013864.t1

Length=960
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  cal_g013864.t1                                                      1732    0.0  
  cal_g009123.t1                                                      35.6    0.51 
  cal_g004497.t1                                                      33.7    1.8  
  cal_g006757.t1                                                      33.7    1.8  
  cal_g006256.t1                                                      33.7    1.8  
  cal_g014145.t1                                                      33.7    1.8  
  cal_g001160.t1                                                      33.7    1.8  
  cal_g006365.t1                                                      33.7    1.8  
  cal_g010394.t1                                                      31.9    6.2  
  cal_g017187.t1                                                      31.9    6.2  
  cal_g005293.t2                                                      31.9    6.2  
  cal_g013912.t1                                                      31.9    6.2  
  cal_g002151.t1                                                      31.9    6.2  
  cal_g014309.t1                                                      31.9    6.2  
  cal_g004422.t1                                                      31.9    6.2  
  cal_g005531.t1                                                      31.9    6.2  
  cal_g008967.t2                                                      31.9    6.2  
  cal_g008967.t1                                                      31.9    6.2  
  cal_g004784.t1                                                      31.9    6.2  
  cal_g005293.t1                                                      31.9    6.2  
  cal_g013912.t2                                                      31.9    6.2  
  cal_g015217.t1                                                      31.9    6.2  
  cal_g012181.t1                                                      31.9    6.2  
  cal_g007362.t1                                                      31.9    6.2  


> cal_g013864.t1
Length=2055

 Score = 1732 bits (1920),  Expect = 0.0
 Identities = 960/960 (100%), Gaps = 0/960 (0%)
 Strand=Plus/Plus

Query  1    ATGGAGGTCTCCTTCGTTTCCAAAGCCAGGACTGCCTTCCATTCCGCTGCTGCTAAAGCG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGGAGGTCTCCTTCGTTTCCAAAGCCAGGACTGCCTTCCATTCCGCTGCTGCTAAAGCG  60

Query  61   GAGAAAGTTTTTGCGGATATTAAAAAATCTGATTCCTCCGCCGATCGAGCGGAGCATTCT  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   GAGAAAGTTTTTGCGGATATTAAAAAATCTGATTCCTCCGCCGATCGAGCGGAGCATTCT  120

Query  121  AATGCACAATTGCAGAAGGAATTAACCCCGGATTCTGTGAATACCAAGGAAGACGATTCG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  AATGCACAATTGCAGAAGGAATTAACCCCGGATTCTGTGAATACCAAGGAAGACGATTCG  180

Query  181  GAGTATTGTGGAGGAACCAAGCAGTCAAAGCGCAAACCACCTCCTATAAAGACAAAGCAA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  GAGTATTGTGGAGGAACCAAGCAGTCAAAGCGCAAACCACCTCCTATAAAGACAAAGCAA  240

Query  241  GACTGGCAAGAGAGATTTAAGAACATAAGAATAGGGAAGAGAGGGAACGAGGATACTGAG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  GACTGGCAAGAGAGATTTAAGAACATAAGAATAGGGAAGAGAGGGAACGAGGATACTGAG  300

Query  301  AAAAGTGAAAATTCAAAAATGGCGTATGCAATCTTTGATGAAAATTTATACCTCATAAGG  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  AAAAGTGAAAATTCAAAAATGGCGTATGCAATCTTTGATGAAAATTTATACCTCATAAGG  360

Query  361  GAGAGAGAAGTTTTTCATTCAGAGGAATCAAAATCTGGTTCTGGAGGTCAAGATTTCGAT  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  GAGAGAGAAGTTTTTCATTCAGAGGAATCAAAATCTGGTTCTGGAGGTCAAGATTTCGAT  420

Query  421  TCCTCGAATGCAAATATTATTCCTAGTACATCTGTCATTAGACAGTTGGCCGTAGCAATT  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  TCCTCGAATGCAAATATTATTCCTAGTACATCTGTCATTAGACAGTTGGCCGTAGCAATT  480

Query  481  GAGACTTCAAAGAATTATAATTCAATGATGGATCTCATGGCTTCATCAAGAGATTCTTCA  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  GAGACTTCAAAGAATTATAATTCAATGATGGATCTCATGGCTTCATCAAGAGATTCTTCA  540

Query  541  CCTGTCCGAGAAAGGGCTGCCTTGGGCTTCTCTGCTGTGAAATCACTAGTACTACGTGAA  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  CCTGTCCGAGAAAGGGCTGCCTTGGGCTTCTCTGCTGTGAAATCACTAGTACTACGTGAA  600

Query  601  AAGGAAGAAAAACTTGTGACCGAGTTTGGTACCAATGAGAAAGTACTTTCTTTAATCAAA  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  601  AAGGAAGAAAAACTTGTGACCGAGTTTGGTACCAATGAGAAAGTACTTTCTTTAATCAAA  660

Query  661  TCACTACTACACGCAGAAGGACAGTCTCTAATAGGAAGGGATGAGCGTGAGGCAGGAGAA  720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  TCACTACTACACGCAGAAGGACAGTCTCTAATAGGAAGGGATGAGCGTGAGGCAGGAGAA  720

Query  721  ATCACAAATATGTCATCCTTGATTAAAGATATTCATGGTGCTCCACCTGAGAGTTTTGTA  780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  721  ATCACAAATATGTCATCCTTGATTAAAGATATTCATGGTGCTCCACCTGAGAGTTTTGTA  780

Query  781  GTTAAGCTCTCTGAAGCCATTGGAAGCTTGAAAACCCTGCGAAAAATGGCATCCTTCTGG  840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  781  GTTAAGCTCTCTGAAGCCATTGGAAGCTTGAAAACCCTGCGAAAAATGGCATCCTTCTGG  840

Query  841  AGTAGAGTTGTAACTGAAATGAGACGACTCTGGTCTGAATGGAAATATATCCCCGGCATT  900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  841  AGTAGAGTTGTAACTGAAATGAGACGACTCTGGTCTGAATGGAAATATATCCCCGGCATT  900

Query  901  CCACCAGATGAGGTTCCAGACTTGAATTCCTGTCTTTTGTATCAGCAGTTACAGGTCATC  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  901  CCACCAGATGAGGTTCCAGACTTGAATTCCTGTCTTTTGTATCAGCAGTTACAGGTCATC  960


> cal_g009123.t1
Length=1527

 Score = 35.6 bits (38),  Expect = 0.51
 Identities = 32/39 (82%), Gaps = 5/39 (13%)
 Strand=Plus/Plus

Query  501   TTCAATGATGGATCTCATGGC--TTCATCAAGAGATTCT  537
             ||||| ||||||||||| |||  ||||||   |||||||
Sbjct  1086  TTCAAGGATGGATCTCACGGCAATTCATC---AGATTCT  1121


> cal_g004497.t1
Length=3624

 Score = 33.7 bits (36),  Expect = 1.8
 Identities = 23/26 (88%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  423   CTCGAATGCAAATATTATTCCTAGTA  448
             ||||| |||||  |||||||||||||
Sbjct  2121  CTCGACTGCAATAATTATTCCTAGTA  2146


> cal_g006757.t1
Length=2277

 Score = 33.7 bits (36),  Expect = 1.8
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  128   AATTGCAGAAGGAATTAA  145
             ||||||||||||||||||
Sbjct  1211  AATTGCAGAAGGAATTAA  1228


> cal_g006256.t1
Length=1869

 Score = 33.7 bits (36),  Expect = 1.8
 Identities = 21/23 (91%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  332  TCTTTGATGAAAATTTATACCTC  354
            |||||||||||||||  ||||||
Sbjct  123  TCTTTGATGAAAATTCTTACCTC  101


> cal_g014145.t1
Length=1659

 Score = 33.7 bits (36),  Expect = 1.8
 Identities = 23/26 (88%), Gaps = 0/26 (0%)
 Strand=Plus/Minus

Query  329   CAATCTTTGATGAAAATTTATACCTC  354
             || ||||||| ||| |||||||||||
Sbjct  1116  CATTCTTTGAAGAAGATTTATACCTC  1091


> cal_g001160.t1
Length=5316

 Score = 33.7 bits (36),  Expect = 1.8
 Identities = 24/28 (86%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  64    AAAGTTTTTGCGGATATTAAAAAATCTG  91
             ||||||||||||||| |||| | | |||
Sbjct  3511  AAAGTTTTTGCGGATTTTAATATAACTG  3538


> cal_g006365.t1
Length=1863

 Score = 33.7 bits (36),  Expect = 1.8
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  496  TATAATTCAATGATGGAT  513
            ||||||||||||||||||
Sbjct  556  TATAATTCAATGATGGAT  573


> cal_g010394.t1
Length=1479

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  240   AGACTGGCAAGAGAGATTTA  259
             |||| |||||||||||||||
Sbjct  1320  AGACAGGCAAGAGAGATTTA  1339


> cal_g017187.t1
Length=381

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 22/25 (88%), Gaps = 0/25 (0%)
 Strand=Plus/Plus

Query  327  TGCAATCTTTGATGAAAATTTATAC  351
            |||||||  ||||||||||| ||||
Sbjct  84   TGCAATCAATGATGAAAATTCATAC  108


> cal_g005293.t2
Length=336

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 34/44 (77%), Gaps = 2/44 (5%)
 Strand=Plus/Minus

Query  278  AGAGAGGGAACGAGGATACTGAGAAAAGTGAAAATTCAAAAATG  321
            ||| || ||||||||||||  ||||||| | || | ||  ||||
Sbjct  260  AGATAGAGAACGAGGATAC--AGAAAAGCGTAAGTACAGGAATG  219


> cal_g013912.t1
Length=2673

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 23/26 (88%), Gaps = 2/26 (8%)
 Strand=Plus/Plus

Query  389  CAAAATCTGGTTCTGGAGGTCAAGAT  414
            ||||||  |||||||||||||| |||
Sbjct  655  CAAAAT--GGTTCTGGAGGTCATGAT  678


> cal_g002151.t1
Length=2067

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  788   TCTCTGAAGCCATTGGA  804
             |||||||||||||||||
Sbjct  1543  TCTCTGAAGCCATTGGA  1559


> cal_g014309.t1
Length=1845

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  823   AAAATGGCATCCTTCTGGAG  842
             || |||||||||||||||||
Sbjct  1398  AATATGGCATCCTTCTGGAG  1379


> cal_g004422.t1
Length=3348

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 25/29 (86%), Gaps = 1/29 (3%)
 Strand=Plus/Plus

Query  177   TTCGGAGTATTGTGGAGGA-ACCAAGCAG  204
             |||||||||||||||| || |  ||||||
Sbjct  2423  TTCGGAGTATTGTGGATGAGATAAAGCAG  2451


> cal_g005531.t1
Length=3474

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  607   GAAAAACTTGTGACCGA  623
             |||||||||||||||||
Sbjct  2452  GAAAAACTTGTGACCGA  2468


> cal_g008967.t2
Length=1302

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  385  GAATCAAAATCTGGTTCTGG  404
            || |||||||||||||||||
Sbjct  259  GATTCAAAATCTGGTTCTGG  278


> cal_g008967.t1
Length=1953

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  385  GAATCAAAATCTGGTTCTGG  404
            || |||||||||||||||||
Sbjct  910  GATTCAAAATCTGGTTCTGG  929


> cal_g004784.t1
Length=1554

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Plus

Query  236  AGCAAGACTGGCAAGAGAGATT  257
            ||||||||||| ||||| ||||
Sbjct  556  AGCAAGACTGGGAAGAGTGATT  577


> cal_g005293.t1
Length=477

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 34/44 (77%), Gaps = 2/44 (5%)
 Strand=Plus/Minus

Query  278  AGAGAGGGAACGAGGATACTGAGAAAAGTGAAAATTCAAAAATG  321
            ||| || ||||||||||||  ||||||| | || | ||  ||||
Sbjct  260  AGATAGAGAACGAGGATAC--AGAAAAGCGTAAGTACAGGAATG  219


> cal_g013912.t2
Length=2673

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 23/26 (88%), Gaps = 2/26 (8%)
 Strand=Plus/Plus

Query  389  CAAAATCTGGTTCTGGAGGTCAAGAT  414
            ||||||  |||||||||||||| |||
Sbjct  655  CAAAAT--GGTTCTGGAGGTCATGAT  678


> cal_g015217.t1
Length=1806

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 31/40 (78%), Gaps = 0/40 (0%)
 Strand=Plus/Plus

Query  49   GCTGCTAAAGCGGAGAAAGTTTTTGCGGATATTAAAAAAT  88
            ||||||||||| |  |||| |||    ||||||| |||||
Sbjct  406  GCTGCTAAAGCTGCAAAAGGTTTCCTTGATATTACAAAAT  445


> cal_g012181.t1
Length=1941

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 25/30 (83%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  239  AAGACTGGCAAGAGAGATTTAAGAACATAA  268
            ||| || ||| || ||||||||||||| ||
Sbjct  410  AAGGCTTGCACGAAAGATTTAAGAACAGAA  439


> cal_g007362.t1
Length=2601

 Score = 31.9 bits (34),  Expect = 6.2
 Identities = 25/30 (83%), Gaps = 0/30 (0%)
 Strand=Plus/Minus

Query  371   TTTTTCATTCAGAGGAATCAAAATCTGGTT  400
             ||||||||||| | ||| || |||||| ||
Sbjct  1362  TTTTTCATTCATATGAAGCAGAATCTGCTT  1333



Lambda      K        H
   0.634    0.408    0.912 

Gapped
Lambda      K        H
   0.625    0.410    0.780 

Effective search space used: 25633580679


  Database: Calotropis_gigantea.cds
    Posted date:  Jan 8, 2019  5:12 AM
  Number of letters in database: 28,036,827
  Number of sequences in database:  20,832



Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2