TBLASTN 2.2.28+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: Mentha_longifoli.cds
           4,584 sequences; 4,086,677 total letters



Query= WP_000003071.1 MULTISPECIES: lysine--tRNA ligase [Proteobacteria]

Length=505
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  lcl|NZ_CP014768.1_cds_WP_000003071.1_3646 [locus_tag=A0259_RS18...  1038    0.0  
  lcl|NZ_CP014768.1_cds_WP_001295090.1_446 [locus_tag=A0259_RS022...   938    0.0  
  lcl|NZ_CP014768.1_cds_WP_000004771.1_475 [locus_tag=A0259_RS024...   140    5e-38
  lcl|NZ_CP014768.1_cds_WP_001258678.1_2732 [locus_tag=A0259_RS13...  94.7    2e-21
  lcl|NZ_CP014768.1_cds_WP_000117881.1_1765 [locus_tag=A0259_RS08...  63.9    1e-11
  lcl|NZ_CP014768.1_cds_WP_000138915.1_309 [locus_tag=A0259_RS016...  31.2    0.20 
  lcl|NZ_CP014768.1_cds_WP_001301303.1_150 [locus_tag=A0259_RS007...  28.5    1.1  
  lcl|NZ_CP014768.1_cds_WP_001061095.1_1864 [locus_tag=A0259_RS09...  27.7    1.3  
  lcl|NZ_CP014768.1_cds_WP_000377786.1_18 [locus_tag=A0259_RS0008...  28.1    1.5  
  lcl|NZ_CP014768.1_cds_WP_001295442.1_1919 [locus_tag=A0259_RS09...  26.6    4.0  
  lcl|NZ_CP014768.1_cds_WP_001320474.1_2789 [locus_tag=A0259_RS13...  25.8    9.1  


> lcl|NZ_CP014768.1_cds_WP_000003071.1_3646 [locus_tag=A0259_RS18015] 
[protein=lysine--tRNA ligase] [protein_id=WP_000003071.1] 
[location=complement(3644643..3646160)] [gbkey=CDS]
Length=1518

 Score = 1038 bits (2685),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 505/505 (100%), Positives = 505/505 (100%), Gaps = 0/505 (0%)
 Frame = +1

Query  1     MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE  60
             MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE
Sbjct  1     MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE  180

Query  61    LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD  120
             LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
Sbjct  181   LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD  360

Query  121   ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES  180
             ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
Sbjct  361   ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES  540

Query  181   RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP  240
             RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP
Sbjct  541   RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP  720

Query  241   ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT  300
             ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
Sbjct  721   ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT  900

Query  301   LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI  360
             LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI
Sbjct  901   LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI  1080

Query  361   HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG  420
             HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
Sbjct  1081  HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG  1260

Query  421   REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID  480
             REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
Sbjct  1261  REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID  1440

Query  481   RMVMLFTNSHTIRDVILFPAMRPVK  505
             RMVMLFTNSHTIRDVILFPAMRPVK
Sbjct  1441  RMVMLFTNSHTIRDVILFPAMRPVK  1515


> lcl|NZ_CP014768.1_cds_WP_001295090.1_446 [locus_tag=A0259_RS02285] 
[protein=lysine--tRNA ligase heat inducible] [protein_id=WP_001295090.1] 
[location=complement(480683..482200)] [gbkey=CDS]
Length=1518

 Score =  938 bits (2424),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 447/505 (89%), Positives = 479/505 (95%), Gaps = 0/505 (0%)
 Frame = +1

Query  1     MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE  60
             MSEQ  +GA+  +D N+EL+ RREKLA LR+QG+AFPNDFRRDHTS+QLH EFD K+N+E
Sbjct  1     MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSEQLHEEFDAKDNQE  180

Query  61    LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD  120
             LE+LNIEV+VAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD LPEGVYN+QFKKWDLGD
Sbjct  181   LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD  360

Query  121   ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES  180
             I+GA+G LFKT+TGELSIHCTELRLLTKALRPLPDKFHGLQDQE RYRQRYLDLI+ND+S
Sbjct  361   IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS  540

Query  181   RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP  240
             R TF VRS+IL+ IRQFMV RGFMEVETPMMQVIPGGA+ARPFITHHNALDLDMYLRIAP
Sbjct  541   RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP  720

Query  241   ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT  300
             ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADY DLIELTESLFRT
Sbjct  721   ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT  900

Query  301   LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI  360
             LAQ++LG T+VTYG+   DFGKPFEKLTMREAIKKYRPETDMADLDNFD+AKA+AESIGI
Sbjct  901   LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI  1080

Query  361   HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG  420
              VEKSWGLGRIVTEIF+EVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
Sbjct  1081  TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG  1260

Query  421   REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID  480
             REIGNGFSELNDAEDQA+RF +QV AK AGDDEAMFYDEDYVTALE+GLPPTAGLGIGID
Sbjct  1261  REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID  1440

Query  481   RMVMLFTNSHTIRDVILFPAMRPVK  505
             RM+MLFTNSHTIRDVILFPAMRP K
Sbjct  1441  RMIMLFTNSHTIRDVILFPAMRPQK  1515


> lcl|NZ_CP014768.1_cds_WP_000004771.1_475 [locus_tag=A0259_RS02425] 
[protein=elongation factor P--(R)-beta-lysine ligase] 
[protein_id=WP_000004771.1] [location=510117..511094] [gbkey=CDS]
Length=978

 Score =  140 bits (353),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 98/321 (31%), Positives = 166/321 (52%), Gaps = 28/321 (9%)
 Frame = +1

Query  187  RSQILSGIRQFMVNRGFMEVETPMM-QVIPGGAAARPFITHH----NALDLDMYLRIAPE  241
            R+ I++ IR+F  +RG +EVETP M Q         PF T      ++  ++++L  +PE
Sbjct  55   RAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPE  234

Query  242  LYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTL  301
             ++KRL+V G   VF++ R+FRNE +   HNPEFTM+E Y  + D   L+   + L + +
Sbjct  235  YHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQV  414

Query  302  AQDILGKTEVTYGDVTLDFGK--PF--EKLTMREAIKKYRPETDMADLDNFDSAKAIAES  357
              D      ++Y    L + +  P   +K  +RE   K        DL N    +   ++
Sbjct  415  L-DCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKL-------DLSNVADTEEDRDT  570

Query  358  IGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFF  417
            + + +  ++G   +   I +E       +PTF+  +PA  + LA+ +  +  + +RFE +
Sbjct  571  L-LQLLFTFG---VEPNIGKE-------KPTFVYHFPASQASLAQISTEDHRVAERFEVY  717

Query  418  IGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGI  477
              G E+ NGF EL DA +Q QRF      + A        D++ + AL+ G+P  +G+ +
Sbjct  718  YKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVAL  897

Query  478  GIDRMVMLFTNSHTIRDVILF  498
            G+DR+VML   + T+ +VI F
Sbjct  898  GVDRLVMLALGAETLAEVIAF  960


> lcl|NZ_CP014768.1_cds_WP_001258678.1_2732 [locus_tag=A0259_RS13455] 
[protein=aspartate--tRNA ligase] [protein_id=WP_001258678.1] 
[location=complement(2674795..2676567)] [gbkey=CDS]
Length=1773

 Score = 94.7 bits (234),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 149/304 (49%), Gaps = 35/304 (12%)
 Frame = +1

Query  61   LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD-----DLPEGVYNEQFKK  115
            L  +  +V + G +  RR +G   F+ ++D  G +Q++   D      L   + NE F  
Sbjct  31   LSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNE-FCI  207

Query  116  WDLGDILGAKGKLFK--TKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLD  173
               G +     K       TGE+ +  + L ++ +A   LP   + +  +EAR + RYLD
Sbjct  208  QVTGTVRARDEKNINRDMATGEIEVLASSLTIINRA-DVLPLDSNHVNTEEARLKYRYLD  384

Query  174  LISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMM-QVIPGGAAARPFITHHNALDL  232
            L    E     K R++I S +R+FM + GF+++ETPM+ +  P GA  R ++        
Sbjct  385  L-RRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGA--RDYLVPSRVHKG  555

Query  233  DMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLI  291
              Y L  +P+L+ + L++ GF+R ++I + FR+E +     PEFT +++  ++     + 
Sbjct  556  KFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVR  735

Query  292  ELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKY---RPE-------TD  341
            E+ E+L R L  ++ G   V  GD        F  +T  EA ++Y   +P+       TD
Sbjct  736  EVMEALVRHLWLEVKG---VDLGD--------FPVMTFAEAERRYGSDKPDLRNPMELTD  882

Query  342  MADL  345
            +ADL
Sbjct  883  VADL  894


 Score = 57.4 bits (137),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 39/147 (27%), Positives = 66/147 (45%), Gaps = 5/147 (3%)
 Frame = +1

Query  354   IAESIGIHVEKSWG-LGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITD  412
             + + +G+  E  W  L  I   +FE+  E  L         P +++    +      + +
Sbjct  1237  VGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVAN  1416

Query  413   RFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT  472
              ++  I G E+G G   +++  D  Q     +   +    E   +    + AL++G PP 
Sbjct  1417  AYDMVINGYEVGGGSVRIHNG-DMQQTVFGILGINEEEQREKFGF---LLDALKYGTPPH  1584

Query  473   AGLGIGIDRMVMLFTNSHTIRDVILFP  499
             AGL  G+DR+ ML T +  IRDVI FP
Sbjct  1585  AGLAFGLDRLTMLLTGTDNIRDVIAFP  1665


> lcl|NZ_CP014768.1_cds_WP_000117881.1_1765 [locus_tag=A0259_RS08760] 
[protein=asparagine--tRNA ligase] [protein_id=WP_000117881.1] 
[location=complement(1772801..1774201)] [gbkey=CDS]
Length=1401

 Score = 63.9 bits (154),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 101/472 (21%), Positives = 183/472 (39%), Gaps = 63/472 (13%)
 Frame = +1

Query  63    ALNIEVAVAGRMMTRR-IMGKASFVTLQD--VGGRIQLYVARDDLPEGVYNEQFKKWDLG  119
             A++ EV V G + TRR      SF+ + D      +Q  V  + LP   YNE   +   G
Sbjct  43    AVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQA-VINNSLPN--YNEDVLRLTTG  213

Query  120   DILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDE  179
               +   GK+  +            ++        PD +        R+   YL  +++  
Sbjct  214   CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTY---PMAAKRHSIEYLREVAHLR  384

Query  180   SRNTF-----KVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLD-  233
              R        +VR  +   + +F   +GF  V TP++       A   F    + LDL+ 
Sbjct  385   PRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF--RVSTLDLEN  558

Query  234   -------------------MYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISV-RHNP  273
                                 +L ++ +L  +        +++     FR E  +  RH  
Sbjct  559   LPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRHLA  735

Query  274   EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAI  333
             EF M+E  +A+A+  D+  L E++ + + + +L +          D  K F +   ++A+
Sbjct  736   EFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERA--------DDMKFFAERVDKDAV  891

Query  334   KKYRP--ETDMADLDNFDSAKAIAESIGIHVEKS--WGLGRIVTEIFEEVAEAHLIQPTF  389
              +     E D A +D  D A  I E+ G   E    WG+  + +E    +AE H   P  
Sbjct  892   SRLERFIEADFAQVDYTD-AVTILENCGRKFENPVYWGVD-LSSEHERYLAEEHFKAPVV  1065

Query  390   ITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF--LDQVAAK  447
             +  YP ++     R + + +     +       +  G  E+     + +R   LD+   +
Sbjct  1066  VKNYPKDIKAFYMRLNEDGKTVAAMDV------LAPGIGEIIGGSQREERLDVLDERMLE  1227

Query  448   DAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP  499
                + E  ++   Y     +G  P +G G+G +R++   T    +RDVI FP
Sbjct  1228  MGLNKEDYWW---YRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFP  1374


> lcl|NZ_CP014768.1_cds_WP_000138915.1_309 [locus_tag=A0259_RS01660] 
[protein=malate synthase A] [protein_id=WP_000138915.1] 
[location=343761..345362] [gbkey=CDS]
Length=1602

 Score = 31.2 bits (69),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 22/60 (37%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
 Frame = +1

Query  11    AVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEELEALNIEVAV  70
             A+   N+ L +R+ +L  +REQ            T+DQL A  DG+  EE    NI VAV
Sbjct  1123  AMAVFNDILGSRKNQLEVMREQDAPI--------TADQLLAPCDGERTEEGMRANIRVAV  1278


> lcl|NZ_CP014768.1_cds_WP_001301303.1_150 [locus_tag=A0259_RS00785] 
[protein=IMPACT family member YigZ] [protein_id=WP_001301303.1] 
[location=159703..160317] [gbkey=CDS]
Length=615

 Score = 28.5 bits (62),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 15/36 (42%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
 Frame = +1

Query  323  PFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESI  358
            P   +T+ E IKK R  T +A  D  ++AKA  ES+
Sbjct  19   PAAPVTVVEEIKKSRFITLLAHTDGVEAAKAFVESV  126


> lcl|NZ_CP014768.1_cds_WP_001061095.1_1864 [locus_tag=A0259_RS09245] 
[protein=poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis 
protein PgaD] [protein_id=WP_001061095.1] [location=complement(1870516..1870929)] 
[gbkey=CDS]
Length=414

 Score = 27.7 bits (60),  Expect = 1.3, Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (49%), Gaps = 10/70 (14%)
 Frame = -3

Query  126  GKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFK  185
            G+L      E + +CT  R LT+   PLP K       E  +  R+    SN+ S + ++
Sbjct  265  GRLHDAAVFENAAYCTAPRQLTRRHSPLPAK----NRTEVGFWPRF---ASNNPSADPWR  107

Query  186  VR---SQILS  192
            +R   +QI+S
Sbjct  106  IRI*TTQIMS  77


> lcl|NZ_CP014768.1_cds_WP_000377786.1_18 [locus_tag=A0259_RS00085] 
[protein=phosphate-specific transport system accessory 
protein PhoU] [protein_id=WP_000377786.1] [location=complement(17491..18216)] 
[gbkey=CDS]
Length=726

 Score = 28.1 bits (61),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 16/54 (30%), Positives = 27/54 (50%), Gaps = 0/54 (0%)
 Frame = -1

Query  422  EIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGL  475
            ++GNGF++ ++    A+R L       AG  +  F+  D + A +H L   A L
Sbjct  297  QLGNGFTDHHNQSQVARRRLTFGDNAHAGFIDRHFHHVDVLVAFDHALRQIAVL  136


> lcl|NZ_CP014768.1_cds_WP_001295442.1_1919 [locus_tag=A0259_RS09535] 
[protein=flagellar L-ring protein] [protein_id=WP_001295442.1] 
[location=1918258..1918956] [gbkey=CDS]
Length=699

 Score = 26.6 bits (57),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 14/44 (32%), Positives = 20/44 (45%), Gaps = 13/44 (30%)
 Frame = -1

Query  223  FITHHNALDLDMYL-------------RIAPELYLKRLVVGGFE  253
            F THH  + +D YL              I P L ++R+  GGF+
Sbjct  501  FFTHHMQVAVDQYLVNRHRQRAAKGIAGIGPALSVERVTTGGFD  370


> lcl|NZ_CP014768.1_cds_WP_001320474.1_2789 [locus_tag=A0259_RS13745] 
[protein=DgsA anti-repressor MtfA] [protein_id=WP_001320474.1] 
[location=2728925..2729722] [gbkey=CDS]
Length=798

 Score = 25.8 bits (55),  Expect = 9.1, Method: Compositional matrix adjust.
 Identities = 17/66 (26%), Positives = 27/66 (41%), Gaps = 0/66 (0%)
 Frame = -1

Query  74   MMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKT  133
            +M  R   +   +++     RI L    + LP+       K W   +I    GK F   T
Sbjct  798  LMNIRRRKRVCIISVMQSQQRILLIKLAETLPQ*RETRSKKFWGAKEIFRKYGKTFSRIT  619

Query  134  GELSIH  139
            G +SI+
Sbjct  618  GSISIN  601



Lambda      K        H        a         alpha
   0.320    0.138    0.397    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 399833361


  Database: Mentha_longifoli.cds
    Posted date:  Jan 8, 2019  3:09 AM
  Number of letters in database: 4,086,677
  Number of sequences in database:  4,584



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40