BLAST Results


TBLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_longifoli.cds 4,584 sequences; 4,086,677 total letters Query= WP_000003071.1 MULTISPECIES: lysine--tRNA ligase [Proteobacteria] Length=505 Score E Sequences producing significant alignments: (Bits) Value lcl|NZ_CP014768.1_cds_WP_000003071.1_3646 [locus_tag=A0259_RS18... 1038 0.0 lcl|NZ_CP014768.1_cds_WP_001295090.1_446 [locus_tag=A0259_RS022... 938 0.0 lcl|NZ_CP014768.1_cds_WP_000004771.1_475 [locus_tag=A0259_RS024... 140 5e-38 lcl|NZ_CP014768.1_cds_WP_001258678.1_2732 [locus_tag=A0259_RS13... 94.7 2e-21 lcl|NZ_CP014768.1_cds_WP_000117881.1_1765 [locus_tag=A0259_RS08... 63.9 1e-11 lcl|NZ_CP014768.1_cds_WP_000138915.1_309 [locus_tag=A0259_RS016... 31.2 0.20 lcl|NZ_CP014768.1_cds_WP_001301303.1_150 [locus_tag=A0259_RS007... 28.5 1.1 lcl|NZ_CP014768.1_cds_WP_001061095.1_1864 [locus_tag=A0259_RS09... 27.7 1.3 lcl|NZ_CP014768.1_cds_WP_000377786.1_18 [locus_tag=A0259_RS0008... 28.1 1.5 lcl|NZ_CP014768.1_cds_WP_001295442.1_1919 [locus_tag=A0259_RS09... 26.6 4.0 lcl|NZ_CP014768.1_cds_WP_001320474.1_2789 [locus_tag=A0259_RS13... 25.8 9.1 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_000003071.1_3646|NZ_CP014768.1_cds_WP_000003071.1_3646 [locus_tag=A0259_RS18015] [protein=lysine--tRNA ligase] [protein_id=WP_000003071.1] [location=complement(3644643..3646160)] [gbkey=CDS] Length=1518 Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/505 (100%), Positives = 505/505 (100%), Gaps = 0/505 (0%) Frame = +1 Query 1 MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE 60 MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE Sbjct 1 MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE 180 Query 61 LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD 120 LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD Sbjct 181 LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD 360 Query 121 ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES 180 ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES Sbjct 361 ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES 540 Query 181 RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP 240 RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP Sbjct 541 RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP 720 Query 241 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 300 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT Sbjct 721 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 900 Query 301 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI 360 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI Sbjct 901 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI 1080 Query 361 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG Sbjct 1081 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 1260 Query 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID Sbjct 1261 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 1440 Query 481 RMVMLFTNSHTIRDVILFPAMRPVK 505 RMVMLFTNSHTIRDVILFPAMRPVK Sbjct 1441 RMVMLFTNSHTIRDVILFPAMRPVK 1515 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_001295090.1_446|NZ_CP014768.1_cds_WP_001295090.1_446 [locus_tag=A0259_RS02285] [protein=lysine--tRNA ligase heat inducible] [protein_id=WP_001295090.1] [location=complement(480683..482200)] [gbkey=CDS] Length=1518 Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/505 (89%), Positives = 479/505 (95%), Gaps = 0/505 (0%) Frame = +1 Query 1 MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE 60 MSEQ +GA+ +D N+EL+ RREKLA LR+QG+AFPNDFRRDHTS+QLH EFD K+N+E Sbjct 1 MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSEQLHEEFDAKDNQE 180 Query 61 LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD 120 LE+LNIEV+VAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD LPEGVYN+QFKKWDLGD Sbjct 181 LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD 360 Query 121 ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES 180 I+GA+G LFKT+TGELSIHCTELRLLTKALRPLPDKFHGLQDQE RYRQRYLDLI+ND+S Sbjct 361 IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS 540 Query 181 RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP 240 R TF VRS+IL+ IRQFMV RGFMEVETPMMQVIPGGA+ARPFITHHNALDLDMYLRIAP Sbjct 541 RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP 720 Query 241 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 300 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADY DLIELTESLFRT Sbjct 721 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT 900 Query 301 LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI 360 LAQ++LG T+VTYG+ DFGKPFEKLTMREAIKKYRPETDMADLDNFD+AKA+AESIGI Sbjct 901 LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI 1080 Query 361 HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420 VEKSWGLGRIVTEIF+EVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG Sbjct 1081 TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 1260 Query 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480 REIGNGFSELNDAEDQA+RF +QV AK AGDDEAMFYDEDYVTALE+GLPPTAGLGIGID Sbjct 1261 REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID 1440 Query 481 RMVMLFTNSHTIRDVILFPAMRPVK 505 RM+MLFTNSHTIRDVILFPAMRP K Sbjct 1441 RMIMLFTNSHTIRDVILFPAMRPQK 1515 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_000004771.1_475|NZ_CP014768.1_cds_WP_000004771.1_475 [locus_tag=A0259_RS02425] [protein=elongation factor P--(R)-beta-lysine ligase] [protein_id=WP_000004771.1] [location=510117..511094] [gbkey=CDS] Length=978 Score = 140 bits (353), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/321 (31%), Positives = 166/321 (52%), Gaps = 28/321 (9%) Frame = +1 Query 187 RSQILSGIRQFMVNRGFMEVETPMM-QVIPGGAAARPFITHH----NALDLDMYLRIAPE 241 R+ I++ IR+F +RG +EVETP M Q PF T ++ ++++L +PE Sbjct 55 RAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPE 234 Query 242 LYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTL 301 ++KRL+V G VF++ R+FRNE + HNPEFTM+E Y + D L+ + L + + Sbjct 235 YHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQV 414 Query 302 AQDILGKTEVTYGDVTLDFGK--PF--EKLTMREAIKKYRPETDMADLDNFDSAKAIAES 357 D ++Y L + + P +K +RE K DL N + ++ Sbjct 415 L-DCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKL-------DLSNVADTEEDRDT 570 Query 358 IGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFF 417 + + + ++G + I +E +PTF+ +PA + LA+ + + + +RFE + Sbjct 571 L-LQLLFTFG---VEPNIGKE-------KPTFVYHFPASQASLAQISTEDHRVAERFEVY 717 Query 418 IGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGI 477 G E+ NGF EL DA +Q QRF + A D++ + AL+ G+P +G+ + Sbjct 718 YKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVAL 897 Query 478 GIDRMVMLFTNSHTIRDVILF 498 G+DR+VML + T+ +VI F Sbjct 898 GVDRLVMLALGAETLAEVIAF 960 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_001258678.1_2732|NZ_CP014768.1_cds_WP_001258678.1_2732 [locus_tag=A0259_RS13455] [protein=aspartate--tRNA ligase] [protein_id=WP_001258678.1] [location=complement(2674795..2676567)] [gbkey=CDS] Length=1773 Score = 94.7 bits (234), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/304 (28%), Positives = 149/304 (49%), Gaps = 35/304 (12%) Frame = +1 Query 61 LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD-----DLPEGVYNEQFKK 115 L + +V + G + RR +G F+ ++D G +Q++ D L + NE F Sbjct 31 LSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNE-FCI 207 Query 116 WDLGDILGAKGKLFK--TKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLD 173 G + K TGE+ + + L ++ +A LP + + +EAR + RYLD Sbjct 208 QVTGTVRARDEKNINRDMATGEIEVLASSLTIINRA-DVLPLDSNHVNTEEARLKYRYLD 384 Query 174 LISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMM-QVIPGGAAARPFITHHNALDL 232 L E K R++I S +R+FM + GF+++ETPM+ + P GA R ++ Sbjct 385 L-RRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGA--RDYLVPSRVHKG 555 Query 233 DMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLI 291 Y L +P+L+ + L++ GF+R ++I + FR+E + PEFT +++ ++ + Sbjct 556 KFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVR 735 Query 292 ELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKY---RPE-------TD 341 E+ E+L R L ++ G V GD F +T EA ++Y +P+ TD Sbjct 736 EVMEALVRHLWLEVKG---VDLGD--------FPVMTFAEAERRYGSDKPDLRNPMELTD 882 Query 342 MADL 345 +ADL Sbjct 883 VADL 894 Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/147 (27%), Positives = 66/147 (45%), Gaps = 5/147 (3%) Frame = +1 Query 354 IAESIGIHVEKSWG-LGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITD 412 + + +G+ E W L I +FE+ E L P +++ + + + Sbjct 1237 VGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVAN 1416 Query 413 RFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472 ++ I G E+G G +++ D Q + + E + + AL++G PP Sbjct 1417 AYDMVINGYEVGGGSVRIHNG-DMQQTVFGILGINEEEQREKFGF---LLDALKYGTPPH 1584 Query 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 AGL G+DR+ ML T + IRDVI FP Sbjct 1585 AGLAFGLDRLTMLLTGTDNIRDVIAFP 1665 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_000117881.1_1765|NZ_CP014768.1_cds_WP_000117881.1_1765 [locus_tag=A0259_RS08760] [protein=asparagine--tRNA ligase] [protein_id=WP_000117881.1] [location=complement(1772801..1774201)] [gbkey=CDS] Length=1401 Score = 63.9 bits (154), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 101/472 (21%), Positives = 183/472 (39%), Gaps = 63/472 (13%) Frame = +1 Query 63 ALNIEVAVAGRMMTRR-IMGKASFVTLQD--VGGRIQLYVARDDLPEGVYNEQFKKWDLG 119 A++ EV V G + TRR SF+ + D +Q V + LP YNE + G Sbjct 43 AVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQA-VINNSLPN--YNEDVLRLTTG 213 Query 120 DILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDE 179 + GK+ + ++ PD + R+ YL +++ Sbjct 214 CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTY---PMAAKRHSIEYLREVAHLR 384 Query 180 SRNTF-----KVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLD- 233 R +VR + + +F +GF V TP++ A F + LDL+ Sbjct 385 PRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF--RVSTLDLEN 558 Query 234 -------------------MYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISV-RHNP 273 +L ++ +L + +++ FR E + RH Sbjct 559 LPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRHLA 735 Query 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAI 333 EF M+E +A+A+ D+ L E++ + + + +L + D K F + ++A+ Sbjct 736 EFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERA--------DDMKFFAERVDKDAV 891 Query 334 KKYRP--ETDMADLDNFDSAKAIAESIGIHVEKS--WGLGRIVTEIFEEVAEAHLIQPTF 389 + E D A +D D A I E+ G E WG+ + +E +AE H P Sbjct 892 SRLERFIEADFAQVDYTD-AVTILENCGRKFENPVYWGVD-LSSEHERYLAEEHFKAPVV 1065 Query 390 ITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF--LDQVAAK 447 + YP ++ R + + + + + G E+ + +R LD+ + Sbjct 1066 VKNYPKDIKAFYMRLNEDGKTVAAMDV------LAPGIGEIIGGSQREERLDVLDERMLE 1227 Query 448 DAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 + E ++ Y +G P +G G+G +R++ T +RDVI FP Sbjct 1228 MGLNKEDYWW---YRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFP 1374 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_000138915.1_309|NZ_CP014768.1_cds_WP_000138915.1_309 [locus_tag=A0259_RS01660] [protein=malate synthase A] [protein_id=WP_000138915.1] [location=343761..345362] [gbkey=CDS] Length=1602 Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 30/60 (50%), Gaps = 8/60 (13%) Frame = +1 Query 11 AVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEELEALNIEVAV 70 A+ N+ L +R+ +L +REQ T+DQL A DG+ EE NI VAV Sbjct 1123 AMAVFNDILGSRKNQLEVMREQDAPI--------TADQLLAPCDGERTEEGMRANIRVAV 1278 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_001301303.1_150|NZ_CP014768.1_cds_WP_001301303.1_150 [locus_tag=A0259_RS00785] [protein=IMPACT family member YigZ] [protein_id=WP_001301303.1] [location=159703..160317] [gbkey=CDS] Length=615 Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/36 (42%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Frame = +1 Query 323 PFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESI 358 P +T+ E IKK R T +A D ++AKA ES+ Sbjct 19 PAAPVTVVEEIKKSRFITLLAHTDGVEAAKAFVESV 126 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_001061095.1_1864|NZ_CP014768.1_cds_WP_001061095.1_1864 [locus_tag=A0259_RS09245] [protein=poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD] [protein_id=WP_001061095.1] [location=complement(1870516..1870929)] [gbkey=CDS] Length=414 Score = 27.7 bits (60), Expect = 1.3, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (49%), Gaps = 10/70 (14%) Frame = -3 Query 126 GKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFK 185 G+L E + +CT R LT+ PLP K E + R+ SN+ S + ++ Sbjct 265 GRLHDAAVFENAAYCTAPRQLTRRHSPLPAK----NRTEVGFWPRF---ASNNPSADPWR 107 Query 186 VR---SQILS 192 +R +QI+S Sbjct 106 IRI*TTQIMS 77 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_000377786.1_18|NZ_CP014768.1_cds_WP_000377786.1_18 [locus_tag=A0259_RS00085] [protein=phosphate-specific transport system accessory protein PhoU] [protein_id=WP_000377786.1] [location=complement(17491..18216)] [gbkey=CDS] Length=726 Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 27/54 (50%), Gaps = 0/54 (0%) Frame = -1 Query 422 EIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGL 475 ++GNGF++ ++ A+R L AG + F+ D + A +H L A L Sbjct 297 QLGNGFTDHHNQSQVARRRLTFGDNAHAGFIDRHFHHVDVLVAFDHALRQIAVL 136 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_001295442.1_1919|NZ_CP014768.1_cds_WP_001295442.1_1919 [locus_tag=A0259_RS09535] [protein=flagellar L-ring protein] [protein_id=WP_001295442.1] [location=1918258..1918956] [gbkey=CDS] Length=699 Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust. Identities = 14/44 (32%), Positives = 20/44 (45%), Gaps = 13/44 (30%) Frame = -1 Query 223 FITHHNALDLDMYL-------------RIAPELYLKRLVVGGFE 253 F THH + +D YL I P L ++R+ GGF+ Sbjct 501 FFTHHMQVAVDQYLVNRHRQRAAKGIAGIGPALSVERVTTGGFD 370 > WP_000003071.1 on lcl|>WP_000003071.1 on lcl|NZ_CP014768.1_cds_WP_001320474.1_2789|NZ_CP014768.1_cds_WP_001320474.1_2789 [locus_tag=A0259_RS13745] [protein=DgsA anti-repressor MtfA] [protein_id=WP_001320474.1] [location=2728925..2729722] [gbkey=CDS] Length=798 Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/66 (26%), Positives = 27/66 (41%), Gaps = 0/66 (0%) Frame = -1 Query 74 MMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKT 133 +M R + +++ RI L + LP+ K W +I GK F T Sbjct 798 LMNIRRRKRVCIISVMQSQQRILLIKLAETLPQ*RETRSKKFWGAKEIFRKYGKTFSRIT 619 Query 134 GELSIH 139 G +SI+ Sbjct 618 GSISIN 601 Lambda K H a alpha 0.320 0.138 0.397 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 399833361 Database: Mentha_longifoli.cds Posted date: Jan 8, 2019 3:09 AM Number of letters in database: 4,086,677 Number of sequences in database: 4,584 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40