BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calotropis_gigantea.cds 20,832 sequences; 28,036,827 total letters Query= MVGT01000864.1 Macleaya cordata isolate BLH2017 scaffold1, whole genome shotgun sequence Length=480 Score E Sequences producing significant alignments: (Bits) Value cal_g015213.t1 35.6 0.25 cal_g015213.t2 35.6 0.25 cal_g009840.t1 33.7 0.87 cal_g016846.t1 33.7 0.87 cal_g018408.t1 31.9 3.0 cal_g018210.t1 31.9 3.0 cal_g008680.t1 31.9 3.0 cal_g018148.t1 31.9 3.0 cal_g003334.t1 31.9 3.0 cal_g013898.t1 31.9 3.0 > MVGT01000864.1 on cal_g015213.t1 Length=2268 Score = 35.6 bits (38), Expect = 0.25 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 199 TTGGACAAAAATTTGAAATCCTCA 222 |||| ||||||||||||||| ||| Sbjct 1139 TTGGTCAAAAATTTGAAATCATCA 1116 > MVGT01000864.1 on cal_g015213.t2 Length=1635 Score = 35.6 bits (38), Expect = 0.25 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 199 TTGGACAAAAATTTGAAATCCTCA 222 |||| ||||||||||||||| ||| Sbjct 506 TTGGTCAAAAATTTGAAATCATCA 483 > MVGT01000864.1 on cal_g009840.t1 Length=3876 Score = 33.7 bits (36), Expect = 0.87 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 209 ATTTGAAATCCTCAGAATCGCAA 231 ||||||||||| ||||||| ||| Sbjct 3315 ATTTGAAATCCACAGAATCTCAA 3293 > MVGT01000864.1 on cal_g016846.t1 Length=483 Score = 33.7 bits (36), Expect = 0.87 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 199 TTGGACAAAAATTTGAAATCCTC 221 ||||||||||||||| |||| || Sbjct 73 TTGGACAAAAATTTGCAATCTTC 51 > MVGT01000864.1 on cal_g018408.t1 Length=2154 Score = 31.9 bits (34), Expect = 3.0 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 6 CAGTTCAAAGGTTTCAGACCAC 27 ||||||||||| ||||| |||| Sbjct 798 CAGTTCAAAGGCTTCAGTCCAC 777 > MVGT01000864.1 on cal_g018210.t1 Length=1590 Score = 31.9 bits (34), Expect = 3.0 Identities = 28/35 (80%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 179 CCACGTGGTACAAGCTAGTTTTGGACAAAAATTTG 213 |||| | || | |||||||||||| || |||||| Sbjct 502 CCACTTTGTTCCAGCTAGTTTTGGCCATGAATTTG 468 > MVGT01000864.1 on cal_g008680.t1 Length=3777 Score = 31.9 bits (34), Expect = 3.0 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 164 TTCAAAGGTTTTGAACCACGTG 185 ||||||| ||||||||||| || Sbjct 2303 TTCAAAGATTTTGAACCACCTG 2282 > MVGT01000864.1 on cal_g018148.t1 Length=1761 Score = 31.9 bits (34), Expect = 3.0 Identities = 20/22 (91%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 205 AAAAATTTGAAATCCTCAGAAT 226 ||| ||| |||||||||||||| Sbjct 1700 AAATATTAGAAATCCTCAGAAT 1721 > MVGT01000864.1 on cal_g003334.t1 Length=1929 Score = 31.9 bits (34), Expect = 3.0 Identities = 25/29 (86%), Gaps = 1/29 (3%) Strand=Plus/Plus Query 90 CTTTGGAGTCCTATAAAATGATGATAGGA 118 |||||| || || ||||||||||| |||| Sbjct 548 CTTTGGCGTGCTTTAAAATGATGA-AGGA 575 > MVGT01000864.1 on cal_g013898.t1 Length=1626 Score = 31.9 bits (34), Expect = 3.0 Identities = 17/17 (100%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 345 CAAGCCATTTTTGTGTA 361 ||||||||||||||||| Sbjct 48 CAAGCCATTTTTGTGTA 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12482818530 Database: Calotropis_gigantea.cds Posted date: Jan 8, 2019 1:24 AM Number of letters in database: 28,036,827 Number of sequences in database: 20,832 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2